Plant Metabolite

Metabolomics platform

Metabololite database for LC-MS based metabolomics of model plant

Arabidopsis thaliana (in-progress)

Name		class	Rt(min)	m/z(neg)	m/z(posi)	note	Ref
3MSOP	3-methylsulfinylpropyl glucosinolate	aliphatic glucosinolate	3.14	422	-		Tohge et al., 2016
4MSOB	4-methylsulfinylbutyl glucosinolate	aliphatic glucosinolate	4.24	436	-		Tohge et al., 2016
5MSOP	5-methylsulfinylpentyl glucosinolate	aliphatic glucosinolate	7.57	450	-		Tohge et al., 2016
6MSOH	6-methylsulfinylhexyl glucosinolate	aliphatic glucosinolate	9.37	464	-		Tohge et al., 2016
7MSOH	7-methylsulfinylheptyl glucosinolate	aliphatic glucosinolate	11.54	478	-		Tohge et al., 2016
8MSOO	8-methylsulfinyloctyl glucosinolate	aliphatic glucosinolate	14.04	492	-		Tohge et al., 2016
4MTB	4-methylthiobutyl glucosinolate	aliphatic glucosinolate	12.81	420	-		Tohge et al., 2016
5MTP	5-methylthiopentyl glucosinolate	aliphatic glucosinolate		434	-
6MTH	6-methylthiohexyl glucosinolate	aliphatic glucosinolate	14.11	448	-		Tohge et al., 2016
7MTH	7-methylthioheptyl glucosinolate	aliphatic glucosinolate	24.00	462	-		Tohge et al., 2016
8MTO	8-methylthiooctyl glucosinolate	aliphatic glucosinolate	28.13	476	-		Tohge et al., 2016
I3M	indolyl-3-methyl glucosinolate	indole glucosinolate	14.11	447	-		Tohge et al., 2016
4MOI3M	4-hydroxy-indolyl-3-methyl glucosinolate	indole glucosinolate	16.67	477	-	incuded by pathgen treatment	Tohge et al., 2016; Brotman et al., 2013
1MOI3M	1-hydroxy-indolyl-3-methyl glucosinolate	indole glucosinolate	19.63	477	-		Tohge et al., 2016
SinG1	sinapoyl-O-1-glucoside	hydroxycinnnamate
SinM	sinapoyl-O-malate	hydroxycinnnamate
SinGSin	di-sinapoyl-O-glucoside	hydroxycinnnamate

 

Brotman Y., Landau U., Cuadros-Inostroza A., Tohge T., Fernie AR., Chet I., Viterbo A., Willmitzer L. (2013) Trichoderma-plant root colonization: escaping early plant defense responses and activation of the antioxidant machinery for saline stress tolerance. PLOS Pathogens, 9, e1003221.

Tohge T., Wendenburg R., Ishihara H., Nakabayashi R., Watanabe M., Sulpice R., Hofgen R., Takayama H., Saito K., Stitt M., Fernie AR. (2016) Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications, 7, 12399.

Tohge T., Nishiyama Y., Hirai MY., Yano M., Nakajima J., Awazuhara M., Inoue E., Takahashi H., Goodenowe DB., Kitayama M., Noji M., Yamazaki M., Saito K. (2005) Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing a MYB transcription factor. The Plant Journal, 42, 218-235.