Plant Metabolite

Metabolomics platform

Metabololite database for LC-MS based metabolomics of model plant

Arabidopsis thaliana (in-progress)

Name   class Rt(min) m/z(neg) m/z(posi) note Ref
3MSOP 3-methylsulfinylpropyl glucosinolate aliphatic glucosinolate 3.14 422 -   Tohge et al., 2016
4MSOB 4-methylsulfinylbutyl glucosinolate aliphatic glucosinolate 4.24 436 -   Tohge et al., 2016
5MSOP 5-methylsulfinylpentyl glucosinolate aliphatic glucosinolate 7.57 450 -   Tohge et al., 2016
6MSOH 6-methylsulfinylhexyl glucosinolate aliphatic glucosinolate 9.37 464 -   Tohge et al., 2016
7MSOH 7-methylsulfinylheptyl glucosinolate aliphatic glucosinolate 11.54 478 -   Tohge et al., 2016
8MSOO 8-methylsulfinyloctyl glucosinolate aliphatic glucosinolate 14.04 492 -   Tohge et al., 2016
4MTB 4-methylthiobutyl glucosinolate aliphatic glucosinolate 12.81 420 -   Tohge et al., 2016
5MTP 5-methylthiopentyl glucosinolate aliphatic glucosinolate   434 -    
6MTH 6-methylthiohexyl glucosinolate aliphatic glucosinolate 14.11 448 -   Tohge et al., 2016
7MTH 7-methylthioheptyl glucosinolate aliphatic glucosinolate 24.00 462 -   Tohge et al., 2016
8MTO 8-methylthiooctyl glucosinolate aliphatic glucosinolate 28.13 476 -   Tohge et al., 2016
I3M indolyl-3-methyl glucosinolate indole glucosinolate 14.11 447 -   Tohge et al., 2016
4MOI3M 4-hydroxy-indolyl-3-methyl glucosinolate indole glucosinolate 16.67 477 - incuded by pathgen treatment Tohge et al., 2016; Brotman et al., 2013
1MOI3M 1-hydroxy-indolyl-3-methyl glucosinolate indole glucosinolate 19.63 477 -   Tohge et al., 2016
SinG1 sinapoyl-O-1-glucoside hydroxycinnnamate          
SinM sinapoyl-O-malate hydroxycinnnamate          
SinGSin di-sinapoyl-O-glucoside hydroxycinnnamate          


Brotman Y., Landau U., Cuadros-Inostroza A., Tohge T., Fernie AR., Chet I., Viterbo A., Willmitzer L. (2013) Trichoderma-plant root colonization: escaping early plant defense responses and activation of the antioxidant machinery for saline stress tolerance. PLOS Pathogens, 9, e1003221.

Tohge T., Wendenburg R., Ishihara H., Nakabayashi R., Watanabe M., Sulpice R., Hofgen R., Takayama H., Saito K., Stitt M., Fernie AR. (2016) Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae. Nature Communications, 7, 12399.

Tohge T., Nishiyama Y., Hirai MY., Yano M., Nakajima J., Awazuhara M., Inoue E., Takahashi H., Goodenowe DB., Kitayama M., Noji M., Yamazaki M., Saito K. (2005) Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing a MYB transcription factor. The Plant Journal, 42, 218-235.