NAIST Division of Biological Science

Achievements

Achievements

October, 2021

Tetsuya Hisanaga, Shota Fujimoto, Yihui Cui, Katsutoshi Sato, Ryosuke Sano, Shohei Yamaoka, Takayuki Kohchi, Frédéric Berger, Keiji Nakajima.(2021) Deep evolutionary origin of gamete-directed zygote activation by KNOX/BELL transcription factors in green plants Elife 2021 Sep 28;10:e57090. doi: 10.7554/eLife.57090.
( 10/05/2021 )

Tao Wang, Daniel Perazza, Fayçal Boussouar, Matteo Cattaneo, Alexandre Bougdour, Florent Chuffart, Sophie Barral, Alexandra Vargas, Ariadni Liakopoulou, Denis Puthier, Lisa Bargier, Yuichi Morozumi, Mahya Jamshidikia, Isabel Garcia-Saez, Carlo Petosa, Sophie Rousseaux, André Verdel, Saadi Khochbin.(2021) ATAD2 controls chromatin-bound HIRA turnover Life Sci Alliance 2021 Sep 27;4(12):e202101151. doi: 10.26508/lsa.202101151. Print 2021 Dec.
( 10/05/2021 )

Akira Nishimura, Yurie Takasaki, Shota Isogai, Yoichi Toyokawa, Ryoya Tanahashi, Hiroshi Takagi.(2021) Role of Gln79 in Feedback Inhibition of the Yeast γ-Glutamyl Kinase by Proline Microorganisms 2021 Sep 7;9(9):1902. doi: 10.3390/microorganisms9091902.
( 10/05/2021 )

Fumihito Hasebe, Honoka Yuba, Takashi Hashimoto, Kazuki Saito, Nobutaka Funa, Tsubasa Shoji.(2021) CRISPR/Cas9-mediated disruption of the PYRROLIDINE KETIDE SYNTHASE gene reduces the accumulation of tropane alkaloids in Atropa belladonna hairy roots Biosci Biotechnol Biochem 2021 Sep 25;zbab165. doi: 10.1093/bbb/zbab165. Online ahead of print.
( 10/05/2021 )

Wataru Hirata, Taiki Tomoda, Shunsuke Yuri, Ayako Isotani.(2021) Generation of the Y-chromosome linked red fluorescent protein transgenic mouse model and sexing at the preimplantation stage Exp Anim 2021 Sep 20. doi: 10.1538/expanim.21-0119. Online ahead of print.
( 10/05/2021 )

Shota Isogai, Hiroshi Takagi.(2021) Correction to: Enhancement of lysine biosynthesis confers high‑temperature stress tolerance to Escherichia coli cells Published Erratum Appl Microbiol Biotechnol 2021 Sep 18. doi: 10.1007/s00253-021-11598-z. Online ahead of print.
( 10/05/2021 )

Chio Oka, Masashi Kawaichi.(2021) HtrA1 meets NETs: does it open a new field? Editorial Blood 2021 Sep 16;138(11):920-921.doi: 10.1182/blood.2021013025.
( 10/05/2021 )

Nobutoshi Yamaguchi.(2021) Heat memory in plants: histone modifications, nucleosome positioning and miRNA accumulation alter heat memory gene expression Genes Genet Syst 2021 Sep 16. doi: 10.1266/ggs.21-00040. Online ahead of print.
( 10/05/2021 )

Yuichi Morozumi, Ai Hishinuma, Suguru Furusawa, Fajar Sofyantoro, Hisashi Tatebe, Kazuhiro Shiozaki.(2021) Fission yeast TOR complex 1 phosphorylates Psk1 through evolutionarily conserved interaction mediated by the TOS motif J Cell Sci 2021 Sep 9;jcs.258865. doi: 10.1242/jcs.258865. Online ahead of print.
( 10/05/2021 )

Jirakhamon Sengking, Chio Oka, Piyawadee Wicha, Nuttapong Yawoot, Jiraporn Tocharus, Waraluck Chaichompoo, Apichart Suksamrarn, Chainarong Tocharus.(2021) Neferine Protects Against Brain Damage in Permanent Cerebral Ischemic Rat Associated with Autophagy Suppression and AMPK/mTOR Regulation Mol Neurobiol 2021 Sep 8. doi: 10.1007/s12035-021-02554-z. Online ahead of print.
( 10/05/2021 )

Mitsuo Osuga, Tamako Nishimura, Shiro Suetsugu.(2021) Development of a green reversibly photoswitchable variant of Eos fluorescent protein with fixation resistance Mol Biol Cell 2021 Sep 8;mbcE21010044.doi: 10.1091/mbc.E21-01-0044. Online ahead of print.
( 10/05/2021 )

Tomoko Kamasaki, Yumi Miyazaki, Susumu Ishikawa, Kazuya Hoshiba, Keisuke Kuromiya, Nobuyuki Tanimura, Yusuke Mori, Motosuke Tsutsumi, Tomomi Nemoto, Ryota Uehara, Shiro Suetsugu, Toshiki Itoh, Yasuyuki Fujita.(2021) FBP17-mediated finger-like membrane protrusions in cell competition between normal and RasV12-transformed cells iScience 2021 Aug 18;24(9):102994.doi: 10.1016/j.isci.2021.102994. eCollection 2021 Sep 24.
( 10/05/2021 )

Md Zobaer Hasan, Syful Islam, Kenichi Matsumoto, Taro Kawai.(2021) Meta-analysis of single-cell RNA-seq data reveals phenotypic switching of immune cells in severe COVID-19 patients Comput Biol Med 2021 Oct;137:104792.doi: 10.1016/j.compbiomed.2021.104792. Epub 2021 Aug 27.
( 10/05/2021 )

September, 2021

Erlei Shang, Xin Wang, Tinghan Li, Fengfei Guo, Toshiro Ito, Bo Sun.(2021) Robust control of floral meristem determinacy by position-specific multifunctions of KNUCKLES Proc Natl Acad Sci U S A. 2021 Sep 7;118(36):e2102826118. doi: 10.1073/pnas.2102826118.
( 09/01/2021 )

Shota Isogai, Hiroshi Takagi.(2021) Enhancement of lysine biosynthesis confers high-temperature stress tolerance to Escherichia coli cells Appl Microbiol Biotechnol. 2021 Aug 29. doi: 10.1007/s00253-021-11519-0. Online ahead of print.
( 09/01/2021 )

Anyaporn Sangkaew, Thanaporn Kojornna, Ryoya Tanahashi, Hiroshi Takagi, Chulee Yompakdee.(2021) A novel yeast-based screening system for potential compounds that can alleviate human α-synuclein toxicity J Appl Microbiol. 2021 Aug 27. doi: 10.1111/jam.15256. Online ahead of print.
( 09/01/2021 )

Kei Shigene, Yuta Hiasa, Yoshito Otake, Mazen Soufi, Suphamon Janewanthanakul, Tamako Nishimura, Yoshinobu Sato, Shiro Suetsugu.(2021) Translation of Cellular Protein Localization Using Convolutional Networks Front Cell Dev Biol. 2021 Aug 5;9:635231. doi: 10.3389/fcell.2021.635231. eCollection 2021.
( 09/01/2021 )

Akira Nishimura, Yuki Yoshikawa, Kazuki Ichikawa, Tetsuma Takemoto, Ryoya Tanahashi, Hiroshi Takagi.(2021) Longevity Regulation by Proline Oxidation in Yeast Microorganisms. 2021 Aug 2;9(8):1650. doi: 10.3390/microorganisms9081650.
( 09/01/2021 )

Cian Duggan, Eleonora Moratto, Zachary Savage, Eranthika Hamilton, Hiroaki Adachi, Chih-Hang Wu, Alexandre Y Leary, Yasin Tumtas, Stephen M Rothery, Abbas Maqbool, Seda Nohut, Toby Ross Martin, Sophien Kamoun, Tolga Osman Bozkurt.(2021) Dynamic localization of a helper NLR at the plant-pathogen interface underpins pathogen recognition Proc Natl Acad Sci U S A. 2021 Aug 24;118(34):e2104997118. doi: 10.1073/pnas.2104997118.
( 09/01/2021 )

Md Zobaer Hasan, Syful Islam, Kenichi Matsumoto, Taro Kawai.(2021) SARS-CoV-2 infection initiates interleukin-17-enriched transcriptional response in different cells from multiple organs Comparative Study Sci Rep. 2021 Aug 19;11(1):16814. doi: 10.1038/s41598-021-96110-3.
( 09/01/2021 )

Rie Watanabe, Hiroki Ashida, Mikiko Kobayashi-Miura, Akiho Yokota, Junji Yodoi.(2021) Effect of chronic administration with human thioredoxin-1 transplastomic lettuce on diabetic mice Food Sci Nutr. 2021 Jun 21;9(8):4232-4242. doi: 10.1002/fsn3.2391. eCollection 2021 Aug.
( 09/01/2021 )

Takeshi Matsui, Eiji Takita, Seika Oiwa, Asuka Yokoyama, Ko Kato, Kazutoshi Sawada.(2021) Lettuce-based production of an oral vaccine against porcine edema disease for the seed lot system Plant Biotechnol (Tokyo). 2021 Jun 25;38(2):239-246. doi: 10.5511/plantbiotechnology.21.0414a.
( 09/01/2021 )

Kouki Abe, Kentarou Baba, Liguo Huang, Koay Teng Wei, Kazunori Okano, Yoichiroh Hosokawa, Naoyuki Inagaki.(2021) Mechanosensitive axon outgrowth mediated by L1-laminin clutch interface Biophys J. 2021 Aug 10;S0006-3495(21)00655-X. doi: 10.1016/j.bpj.2021.08.009. Online ahead of print.
( 09/01/2021 )

Naho Nishigaki, Yoshihisa Yoshimi, Hiroaki Kuki, Tadashi Kunieda, Ikuko Hara-Nishimura, Yoichi Tsumuraya, Daisuke Takahashi, Paul Dupree, Toshihisa Kotake.(2021) Galactoglucomannan structure of Arabidopsis seed-coat mucilage in GDP-mannose synthesis impaired mutants Physiol Plant. 2021 Aug 11. doi:10.1111/ppl.13519. Online ahead of print.
( 09/01/2021 )

Karan Wangpaiboon, Pasunee Laohawuttichai, Sun Yong Kim, Tomoyuki Mori, Santhana Nakapong, Rath Pichyangkura, Piamsook Pongsawasdi, Toshio Hakoshima, Kuakarun Krusong.(2021) A GH13 α-glucosidase from Weissella cibaria uncommonly acts on short-chain maltooligosaccharides Acta Crystallogr D Struct Biol . 2021 Aug 1;77(Pt 8):1064-1076. doi: 10.1107/S205979832100677X. Epub 2021 Jul 29.
( 09/01/2021 )

Shintaroh Kubo, Shun Kai Yang, Corbin S Black, Daniel Dai, Melissa Valente-Paterno, Jacek Gaertig, Muneyoshi Ichikawa, Khanh Huy Bui.(2021) Remodeling and activation mechanisms of outer arm dyneins revealed by cryo-EM EMBO Rep . 2021 Aug 2;e52911. doi: 10.15252/embr.202152911. Online ahead of print.
( 09/01/2021 )

Dhania Novitasari, Riris Istighfari Jenie, Jun-Ya Kato, Edy Meiyanto.(2021) The integrative bioinformatic analysis deciphers the predicted molecular target gene and pathway from curcumin derivative CCA-1.1 against triple-negative breast cancer (TNBC) J Egypt Natl Canc Inst . 2021 Aug 2;33(1):19. doi: 10.1186/s43046-021-00077-1.
( 09/01/2021 )

August, 2021

Akira Akamatsu, Masayuki Fujiwara, Satoshi Hamada, Megumi Wakabayashi, Ai Yao, Qiong Wang, Ken-Ichi Kosami, Thu Thi Dang, Takako Kaneko-Kawano, Fumi Fukada, Ko Shimamoto, Yoji Kawano. (2021) The Small GTPase OsRac1 Forms Two Distinct Immune Receptor Complexes Containing the PRR OsCERK1 and the NLR Pit. Plant Cell Physiol. 2021 Jul 31;pcab121. doi: 10.1093/pcp/pcab121. Online ahead of print.
( 08/03/2021 )

Jianzhen Li, Kenshiro Fujise, Haymar Wint, Yosuke Senju, Shiro Suetsugu, Hiroshi Yamada, Kohji Takei, Tetsuya Takeda. (2021) Dynamin 2 and BAR domain protein pacsin 2 cooperatively regulate formation and maturation of podosomes. Biochem Biophys Res Commun. 2021 Jul 26;571:145-151. doi: 10.1016/j.bbrc.2021.07.041. Online ahead of print.
( 08/03/2021 )

Daishin Ueno, Harunori Kawabe, Shotaro Yamasaki, Taku Demura, Ko Kato. (2021) Feature selection for RNA cleavage efficiency at specific sites using the LASSO regression model in Arabidopsis thaliana. BMC Bioinformatics. 2021 Jul 22;22(1):380. doi: 10.1186/s12859-021-04291-5.
( 08/03/2021 )

Nobutoshi Yamaguchi. (2021) LEAFY, a Pioneer Transcription Factor in Plants: A Mini-Review. Front Plant Sci. 2021 Jul 5;12:701406. doi: 10.3389/fpls.2021.701406. eCollection 2021.
( 08/03/2021 )

Noriko Inada, Naoki Takahashi, Masaaki Umeda. (2021) Arabidopsis thaliana subclass I ACTIN DEPOLYMERIZING FACTORs and vegetative ACTIN2/8 are novel regulators of endoreplication. J Plant Res. 2021 Jul 19. doi: 10.1007/s10265-021-01333-0. Online ahead of print.
( 08/03/2021 )

Kazuo Kobayashi. (2021) Diverse LXG toxin and antitoxin systems specifically mediate intraspecies competition in Bacillus subtilis biofilms. PLoS Genet. 2021 Jul 19;17(7):e1009682. doi: 10.1371/journal.pgen.1009682. eCollection 2021 Jul.
( 08/03/2021 )

Shin-Ichi Hachisuka, Tarou Nishii, Shosuke Yoshida. (2021) Development of a targeted gene disruption system in the PET-degrading bacterium Ideonella sakaiensis and its applications to PETase and MHETase genes. Appl Environ Microbiol. 2021 Jul 14;AEM0002021. doi: 10.1128/AEM.00020-21. Online ahead of print.
( 08/03/2021 )

Andrey Yurkov, Artur Alves, Feng-Yan Bai, Kyria Boundy-Mills, Pietro Buzzini, Neža Čadež, Gianluigi Cardinali, Serge Casaregola, Vishnu Chaturvedi, Valérie Collin, Jack W Fell, Victoria Girard, Marizeth Groenewald, Ferry Hagen, Chris Todd Hittinger, Aleksey V Kachalkin, Markus Kostrzewa, Vassili Kouvelis, Diego Libkind, Xinzhan Liu, Thomas Maier, Wieland Meyer, Gábor Péter, Marcin Piątek, Vincent Robert, Carlos A Rosa, Jose Paulo Sampaio, Matthias Sipiczki, Marc Stadler, Takashi Sugita, Junta Sugiyama, Hiroshi Takagi, Masako Takashima, Benedetta Turchetti, Qi-Ming Wang, Teun Boekhout. (2021)Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes. IMA Fungus. 2021 Jul 13;12(1):18. doi: 10.1186/s43008-021-00067-x.
( 08/03/2021 )

Anne Greifenhagen, Isabell Braunstein, Jens Pfannstiel, Satoko Yoshida, Ken Shirasu, Andreas Schaller, Thomas Spallek. (2021)The Phtheirospermum japonicum isopentenyltransferase PjIPT1a regulates host cytokinin responses in Arabidopsis. New Phytol. 2021 Jul 13. doi: 10.1111/nph.17615. Online ahead of print.
( 08/02/2021 )

Corbin Black, Daniel Chen Dai, Katya Peri, Muneyoshi Ichikawa, Khanh Huy Bui. (2021) Preparation of Doublet Microtubule Fraction for Single ParticleCryo-electron Microscopy. Bio Protoc. 2021 Jun 5;11(11):e4041. doi: 10.21769/BioProtoc.4041.
( 08/02/2021 )

Ryo Nasuno, Natsuko Yoshioka, Yuki Yoshikawa, Hiroshi Takagi. (2021) Cysteine residues in the fourth zinc finger are important for activation of the nitric oxide-inducible transcription factor Fzf1 in the yeast Saccharomyces cerevisiae. Genes Cells. 2021 Jul 10. doi: 10.1111/gtc.12885. Online ahead of print.
( 08/02/2021 )

Satoko Yoshida, Yee Jia Kee. (2021) Large-scale sequencing paves the way for genomic and genetic analyses in parasitic plants. Curr Opin Biotechnol. 2021 Jul 6;70:248-254. doi: 10.1016/j.copbio.2021.06.011. Online ahead of print.
( 08/02/2021 )

Saleh Alseekh, Asaph Aharoni, Yariv Brotman, Kévin Contrepois, John D'Auria, Jan Ewald, Jennifer C Ewald, Paul D Fraser, Patrick Giavalisco, Robert D Hall, Matthias Heinemann, Hannes Link, Jie Luo, Steffen Neumann, Jens Nielsen, Leonardo Perez de Souza, Kazuki Saito, Uwe Sauer, Frank C Schroeder, Stefan Schuster, Gary Siuzdak, Aleksandra Skirycz, Lloyd W Sumner, Michael P Snyder, Huiru Tang, Takayuki Tohge, Yulan Wang, Weiwei Wen, Si Wu, Guowang Xu, Nicola Zamboni, Alisdair R Fernie. (2021) Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. Nat Methods. 2021 Jul;18(7):747-756. doi: 10.1038/s41592-021-01197-1. Epub 2021 Jul 8.
( 08/02/2021 )

Nobutoshi Yamaguchi, Toshiro Ito. (2021) Expression profiling of H3K27me3 demethylase genes during plant development and in response to environmental stress in Arabidopsis. Plant Signal Behav. 2021 Jul 6;1950445. doi: 10.1080/15592324.2021.1950445. Online ahead of print.
( 08/02/2021 )

Nobuhiro Akiyoshi, Ayumi Ihara, Tomoko Matsumoto, Arika Takebayashi, Ryoko Hiroyama, Jun Kikuchi, Taku Demura, Misato Ohtani. (2021) Functional Analysis of Poplar SOMBRERO-type NAC Transcription Factors Yields a Strategy to Modify Woody Cell Wall Properties. Plant Cell Physiol. 2021 Jul 6;pcab102. doi: 10.1093/pcp/pcab102. Online ahead of print.
( 08/02/2021 )

Hooi Ting Hu, Tamako Nishimura, Shiro Suetsugu. (2021) Ultracentrifugal separation, characterization, and functional study of extracellular vesicles derived from serum-free cell culture. STAR Protoc. 2021 Jun 23;2(3):100625. doi: 10.1016/j.xpro.2021.100625. eCollection 2021 Sep 17.
( 08/02/2021 )

Lalida Sangpong, Gholamreza Khaksar, Pinnapat Pinsorn, Akira Oikawa, Ryosuke Sasaki, Alexander Erban, Mutsumi Watanabe, Karan Wangpaiboon, Takayuki Tohge, Joachim Kopka, Rainer Hoefgen, Kazuki Saito, Supaart Sirikantaramas. (2021) Assessing Dynamic Changes of Taste-Related Primary Metabolism During Ripening of Durian Pulp Using Metabolomic and Transcriptomic Analyses. Front Plant Sci. 2021 Jun 18;12:687799. doi: 10.3389/fpls.2021.687799. eCollection 2021.
( 08/02/2021 )

Nobutoshi Yamaguchi. (2021) Removal of H3K27me3 by JMJ Proteins Controls Plant Development and Environmental Responses in Arabidopsis. Front Plant Sci. 2021 Jun 17;12:687416. doi: 10.3389/fpls.2021.687416. eCollection 2021.
( 08/02/2021 )

Shinsuke Yasuda, Risa Kobayashi, Toshiro Ito, Yuko Wada, Seiji Takayama. (2021) Homology-Based Interactions between Small RNAs and Their Targets Control Dominance Hierarchy of Male Determinant Alleles of Self-Incompatibility in Arabidopsis lyrata. Int J Mol Sci. 2021 Jun 29;22(13):6990. doi: 10.3390/ijms22136990.
( 08/02/2021 )

Takafumi Shimizu, Yuri Kanno, Hiromi Suzuki, Shunsuke Watanabe, Mitsunori Seo. (2021) Arabidopsis NPF4.6 and NPF5.1 Control Leaf Stomatal Aperture by Regulating Abscisic Acid Transport. Genes (Basel). 2021 Jun 8;12(6):885. doi: 10.3390/genes12060885.
( 08/02/2021 )

Nobutoshi Yamaguchi, Toshiro Ito.(2021) JMJ Histone Demethylases Balance H3K27me3 and H3K4me3 Levels at the HSP21 Locus during Heat Acclimation in Arabidopsis. Biomolecules. 2021 Jun 7;11(6):852. doi: 10.3390/biom11060852.
( 08/02/2021 )

July, 2021

Dhania Novitasari, Riris Istighfari Jenie, Rohmad Yudi Utomo, Jun Ya Kato, Edy Meiyanto. (2021) CCA-1.1, a Novel Curcumin Analog, Exerts Cytotoxic anti- Migratory Activity toward TNBC and HER2-Enriched Breast Cancer Cells. Asian Pac J Cancer Prev. 2021 Jun 1;22(6):1827-1836. doi: 10.31557/APJCP.2021.22.6.1827.
( 07/02/2021 )

Taiki Katsuyama, Minori Kadoya, Manabu Shirai, Noriaki Sasai. (2021) Sox14 is essential for initiation of neuronal differentiation in the chick spinal cord. Dev Dyn. 2021 Jun 28. doi: 10.1002/dvdy.392. Online ahead of print.
( 07/02/2021 )

Yuki Yoshikawa, Ryo Nasuno, Hiroshi Takagi. (2021) NADPH is important for isobutanol tolerance in a minimal medium of Saccharomyces cerevisiae. Biosci Biotechnol Biochem. 2021 Jun 25;zbab115. doi: 10.1093/bbb/zbab115. Online ahead of print.
( 07/02/2021 )

Hong Ye, Linyi Qiao, Haoyu Guo, Liping Guo, Fei Ren, Jianfang Bai, Yukun Wang.(2021) Genome-Wide Identification of Wheat WRKY Gene Family Reveals That TaWRKY75-A Is Referred to Drought and Salt Resistances. Front Plant Sci. 2021 Jun 4;12:663118. doi: 10.3389/fpls.2021.663118. eCollection 2021.
( 07/02/2021 )

Noriyoshi Yagi, Takehide Kato, Sachihiro Matsunaga, David W Ehrhardt, Masayoshi Nakamura, Takashi Hashimoto. (2021) An anchoring complex recruits katanin for microtubule severing at the plant cortical nucleation sites. Nat Commun. 2021 Jun 17;12(1):3687. doi: 10.1038/s41467-021-24067-y.
( 07/02/2021 )

Naoki Takahashi, Soichi Inagaki, Kohei Nishimura, Hitoshi Sakakibara, Ioanna Antoniadi, Michal Karady, Karin Ljung, Masaaki Umeda. (2021) Alterations in hormonal signals spatially coordinate distinct responses to DNA double-strand breaks in Arabidopsis roots. Sci Adv. 2021 Jun 16;7(25):eabg0993. doi: 10.1126/sciadv.abg0993. Print 2021 Jun.
( 07/02/2021 )

Atsushige Ashimori, Yasukazu Nakahata, Toshiya Sato, Yuichiro Fukamizu, Takaaki Matsui, Hikari Yoshitane, Yoshitaka Fukada, Kazuyuki Shinohara, Yasumasa Bessho. (2021) Attenuated SIRT1 Activity Leads to PER2 Cytoplasmic Localization and Dampens the Amplitude of Bmal1 Promoter-Driven Circadian Oscillation. Front Neurosci. 2021 May 24;15:647589. doi: 10.3389/fnins.2021.647589. eCollection 2021.
( 07/02/2021 )

Nobutoshi Yamaguchi, Satoshi Matsubara, Kaori Yoshimizu, Motohide Seki, Kouta Hamada, Mari Kamitani, Yuko Kurita, Yasuyuki Nomura, Kota Nagashima, Soichi Inagaki, Takamasa Suzuki, Eng-Seng Gan, Taiko To, Tetsuji Kakutani, Atsushi J Nagano, Akiko Satake, Toshiro Ito. (2021) H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis. Nat Commun. 2021 Jun 9;12(1):3480. doi: 10.1038/s41467-021-23766-w.
( 07/02/2021 )

Tomoyuki Fukuda, Kazuhiro Shiozaki. (2021) Multiplexed suppression of TOR complex 1 induces autophagy during starvation. Autophagy. 2021 Jun 14;1-2. doi: 10.1080/15548627.2021.1938915. Online ahead of print.
( 07/02/2021 )

Hirotomo Takatsuka, Masaaki Umeda. (2021) Whole-Mount Immunostaining for the Identification of Histone Modifications in the S-Phase Nuclei of Arabidopsis Roots. Methods Mol Biol. 2021;2329:71-80. doi: 10.1007/978-1-0716-1538-6_6.
( 07/02/2021 )

June, 2021

May, 2021

Naohiro Kon, Hsin-Tzu Wang, Yoshiaki S Kato, Kyouhei Uemoto, Naohiro Kawamoto, Koji Kawasaki, Ryosuke Enoki, Gen Kurosawa, Tatsuto Nakane, Yasunori Sugiyama, Hideaki Tagashira, Motomu Endo, Hideo Iwasaki, Takahiro Iwamoto, Kazuhiko Kume, Yoshitaka Fukada. (2021) Na +/Ca 2+ exchanger mediates cold Ca 2+ signaling conserved for temperature-compensated circadian rhythms. Sci Adv. 2021 Apr 30;7(18):eabe8132. doi: 10.1126/sciadv.abe8132. Print 2021 Apr.
( 05/07/2021 )

Masaki Nishikawa, Kazuo Kobayashi. (2021) Calcium prevents biofilm dispersion in Bacillus subtilis. J Bacteriol. 2021 Apr 29;JB.00114-21. doi: 10.1128/JB.00114-21. Online ahead of print.
( 05/07/2021 )

Fiqri D Khaidizar, Yasumasa Bessho, Yasukazu Nakahata. (2021) Nicotinamide Phosphoribosyltransferase as a Key Molecule of the Aging/Senescence Process. Int J Mol Sci. 2021 Apr 2;22(7):3709. doi: 10.3390/ijms22073709.
( 05/07/2021 )

Yukimi Y Taniguchi, Udo Gowik, Yuto Kinoshita, Risa Kishizaki, Naoaki Ono, Akiho Yokota, Peter Westhoff, Yuri N Munekage. (2021) Dynamic changes of genome sizes and gradual gain of cell-specific distribution of C 4 enzymes during C 4 evolution in genus Flaveria. Plant Genome. 2021 Apr 29;e20095. doi: 10.1002/tpg2.20095. Online ahead of print.
( 05/07/2021 )

Takaaki Yonekura, Munetaka Sugiyama. (2021) Symmetry and its transition in phyllotaxis. J Plant Res. 2021 Apr 28. doi: 10.1007/s10265-021-01308-1. Online ahead of print.
( 05/07/2021 )

Joonghyuk Park, Seungchul Lee, Geuntae Park, Hyunwoo Cho, Daeseok Choi, Masaaki Umeda, Yeonhee Choi, Daehee Hwang, Ildoo Hwang. (2021) CYTOKININ-RESPONSIVE GROWTH REGULATOR Regulates Cell Expansion and Cytokinin-Mediated Cell Cycle Progression. Plant Physiol. 2021 Apr 28;kiab180. doi: 10.1093/plphys/kiab180. Online ahead of print.
( 05/07/2021 )

Chaiwat Aneklaphakij, Tomoki Saigo, Mutsumi Watanabe, Thomas Naake, Alisdair R Fernie, Somnuk Bunsupa, Veena Satitpatipan, Takayuki Tohge. (2021) Diversity of Chemical Structures and Biosynthesis of Polyphenols in Nut-Bearing Species. Front Plant Sci. 2021 Apr 6;12:642581. doi: 10.3389/fpls.2021.642581. eCollection 2021.
( 05/07/2021 )

Chloe E Snider, Wan Nurul Izzati Wan Mohamad Noor, Nhung Thi Hong Nguyen, Kathleen L Gould, Shiro Suetsugu. (2021) The state of F-BAR domains as membrane-bound oligomeric platforms. Trends Cell Biol. 2021 Apr 20;S0962-8924(21)00069-6. doi: 10.1016/j.tcb.2021.03.013. Online ahead of print.
( 05/07/2021 )

Shiori Terada, Minoru Kubo, Nobuhiro Akiyoshi, Ryosuke Sano, Toshihisa Nomura, Shinichiro Sawa, Misato Ohtani, Taku Demura. (2021) Expression of peat moss VASCULAR RELATED NAC-DOMAIN homologs in Nicotiana benthamiana leaf cells induces ectopic secondary wall formation. Plant Mol Biol. 2021 Apr 21. doi: 10.1007/s11103-021-01148-6. Online ahead of print.
( 05/07/2021 )

Sylvie Manuse, Yue Shan, Silvia J Canas-Duarte, Somenath Bakshi, Wei-Sheng Sun, Hirotada Mori, Johan Paulsson, Kim Lewis. (2021) Bacterial persisters are a stochastically formed subpopulation of low-energy cells. PLoS Biol. 2021 Apr 19;19(4):e3001194. doi: 10.1371/journal.pbio.3001194. eCollection 2021 Apr.
( 05/07/2021 )

Yuting Liu, Mutsumi Watanabe, Sayuri Yasukawa, Yuriko Kawamura, Chaiwat Aneklaphakij, Alisdair R Fernie, Takayuki Tohge. (2021) Cross-Species Metabolic Profiling of Floral Specialized Metabolism Facilitates Understanding of Evolutional Aspects of Metabolism Among Brassicaceae Species. Front Plant Sci. 2021 Mar 31;12:640141. doi: 10.3389/fpls.2021.640141. eCollection 2021.
( 05/07/2021 )

Yuki Kishimoto, Iori Nishiura, Wataru Hirata, Shunsuke Yuri, Nami Yamamoto, Masahito Ikawa, Ayako Isotani. (2021) A novel tissue specific alternative splicing variant mitigates phenotypes in Ets2 frame-shift mutant models. Sci Rep. 2021 Apr 15;11(1):8297. doi: 10.1038/s41598-021-87751-5.
( 05/07/2021 )

Akira Watanabe, Ashiqur Rahman, Kazuhiko Nishitani, Rie Yamada, Mariko Takahashi, Satoru Tsugawa, Taku Demura. (2021) Laser micromarking technique in studying the negative gravitropism in pea stem. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):485-488. doi: 10.5511/plantbiotechnology.20.0923a.
( 05/07/2021 )

Miyuki T Nakata, Mao Nakao, Asuka Denda, Yusuke Onoda, Haruko Ueda, Taku Demura. (2021) Estimating the flexural rigidity of Arabidopsis inflorescence stems: Free-vibration test vs. three-point bending test. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):471-474. doi: 10.5511/plantbiotechnology.20.1214a.
( 05/07/2021 )

Tadashi Kunieda, Keisuke Kishida, Jumpei Kawamura, Taku Demura. (2021) Influence of osmotic condition on secondary cell wall formation of xylem vessel cells induced by the master transcription factor VND7. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):465-469. doi: 10.5511/plantbiotechnology.20.1127a.
( 05/07/2021 )

Satoru Tsugawa, Norihiro Kanda, Moritaka Nakamura, Tatsuaki Goh, Misato Ohtani, Taku Demura. (2021) Spatio-temporal kinematic analysis of shoot gravitropism in Arabidopsis thaliana. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):443-450. doi: 10.5511/plantbiotechnology.20.0708a.
( 05/07/2021 )

Ryusuke Nakai, Takashi Azuma, Yosuke Nakaso, Shinichiro Sawa, Taku Demura. (2021) Development of a dynamic imaging method for gravitropism in pea sprouts using clinical magnetic resonance imaging system. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):437-442. doi: 10.5511/plantbiotechnology.20.1020a.
( 05/07/2021 )

Marcel Pascal Beier, Satoru Tsugawa, Taku Demura, Toru Fujiwara. (2021) Root shape adaptation to mechanical stress derived from unidirectional vibrations in Populus nigra. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):423-428. doi: 10.5511/plantbiotechnology.20.0813a.
( 05/07/2021 )

Eri Akita, Yaxiaer Yalikun, Kazunori Okano, Yuki Yamasaki, Misato Ohtani, Yo Tanaka, Taku Demura, Yoichiroh Hosokawa. (2021) In situ measurement of cell stiffness of Arabidopsis roots growing on a glass micropillar support by atomic force microscopy. Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):417-422. doi: 10.5511/plantbiotechnology.20.1016a.
( 05/07/2021 )

Taku Demura. (2021) Preface to the special issue "Approaches for strategies of mechanical optimization in plants". Plant Biotechnol (Tokyo). 2020 Dec 25;37(4):393-395. doi: 10.5511/plantbiotechnology.20.0001p.
( 05/07/2021 )

Hiroshi Takagi. (2021) Molecular mechanisms and highly functional development for stress tolerance of the yeast Saccharomyces cerevisiae. Biosci Biotechnol Biochem. 2021 Apr 24;85(5):1017-1037. doi: 10.1093/bbb/zbab022.
( 05/07/2021 )

Sophia P M Sok, Daisuke Ori, Ayana Wada, Haruna Okude, Takumi Kawasaki, Masatoshi Momota, Noor Hasima Nagoor, Taro Kawai. (2021) 1'-acetoxychavicol acetate inhibits NLRP3-dependent inflammasome activation via mitochondrial ROS suppression. Int Immunol. 2021 Apr 8;dxab016. doi: 10.1093/intimm/dxab016. Online ahead of print.
( 05/07/2021 )

Huong Thi Phuong, Yuki Ishiwata-Kimata, Yuki Nishi, Norie Oguchi, Hiroshi Takagi, Yukio Kimata. (2021) Aeration mitigates endoplasmic reticulum stress in Saccharomyces cerevisiae even without mitochondrial respiration. Microb Cell. 2021 Mar 31;8(4):77-86. doi: 10.15698/mic2021.04.746.
( 05/07/2021 )

April, 2021

Koichi Toyoda, Masayuki Inui.(2021) The ldhA Gene Encoding Fermentative l-Lactate Dehydrogenase in Corynebacterium Glutamicum Is Positively Regulated by the Global Regulator GlxR. Microorganisms. 2021 Mar 6;9(3):550. doi: 10.3390/microorganisms9030550.
( 04/05/2021 )

Ryohei Yasukuni, Daiki Minamino, Takanori Iino, Takashi Araki, Kohei Takao, Sohei Yamada, Yasumasa Bessho, Takaaki Matsui, Yoichiroh Hosokawa. (2021) Pulsed laser activated impulse response encoder (PLAIRE): sensitive evaluation of surface cellular stiffness on zebrafish embryos. Biomed Opt Express. 2021 Feb 9;12(3):1366-1374. doi: 10.1364/BOE.414338. eCollection 2021 Mar 1.
( 04/05/2021 )

Natsumi Masumoto, Yuki Suzuki, Songkui Cui, Mayumi Wakazaki, Mayuko Sato, Kie Kumaishi, Arisa Shibata, Kaori M Furuta, Yasunori Ichihashi, Ken Shirasu, Kiminori Toyooka, Yoshinobu Sato, Satoko Yoshida. (2021) Three-dimensional reconstructions of haustoria in two parasitic plant species in the Orobanchaceae. Plant Physiol. 2021 Jan 25;kiab005. doi: 10.1093/plphys/kiab005. Online ahead of print.
( 04/05/2021 )

Satoshi Ogawa, Takanori Wakatake, Thomas Spallek, Juliane K Ishida, Ryosuke Sano, Tetsuya Kurata, Taku Demura, Satoko Yoshida, Yasunori Ichihashi, Andreas Schaller, Ken Shirasu. (2021) Subtilase activity in intrusive cells mediates haustorium maturation in parasitic plants. Plant Physiol. 2020 Dec 18;kiaa001. doi: 10.1093/plphys/kiaa001. Online ahead of print.
( 04/05/2021 )

Thomas Naake, Hiroshi A Maeda, Sebastian Proost, Takayuki Tohge, Alisdair R Fernie. (2021) Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily. Plant Physiol. 2020 Dec 30;kiaa086. doi: 10.1093/plphys/kiaa086. Online ahead of print.
( 04/05/2021 )

Kaori Miyashima Furuta, Lei Xiang, Songkui Cui, Satoko Yoshida.(2021) Molecular dissection of haustorium development in Orobanchaceae parasitic plants. Plant Physiol. 2021 Mar 30;kiab153. doi: 10.1093/plphys/kiab153. Online ahead of print.
( 04/05/2021 )

Quynh Giang Le, Yukio Kimata.(2021) Multiple ways for stress sensing and regulation of the endoplasmic reticulum-stress sensors. Cell Struct Funct. 2021 Mar 26. doi: 10.1247/csf.21015. Online ahead of print.
( 04/05/2021 )

Satoko Miyatake, Mitsuhiro Kato, Takuma Kumamoto, Tomonori Hirose, Eriko Koshimizu, Takaaki Matsui, Hideyuki Takeuchi, Hiroshi Doi, Keisuke Hamada, Mitsuko Nakashima, Kazunori Sasaki, Akio Yamashita, Atsushi Takata, Kohei Hamanaka, Mai Satoh, Takabumi Miyama, Yuri Sonoda, Momoko Sasazuki, Hiroyuki Torisu, Toshiro Hara, Yasunari Sakai, Yushi Noguchi, Mazumi Miura, Yoko Nishimura, Kazuyuki Nakamura, Hideyuki Asai, Nodoka Hinokuma, Fuyuki Miya, Tatsuhiko Tsunoda, Masami Togawa, Yukihiro Ikeda, Nobusuke Kimura, Kaoru Amemiya, Asako Horino, Masataka Fukuoka, Hiroko Ikeda, Goni Merhav, Nina Ekhilevitch, Masaki Miura, Takeshi Mizuguchi, Noriko Miyake, Atsushi Suzuki, Shouichi Ohga, Hirotomo Saitsu, Hidehisa Takahashi, Fumiaki Tanaka, Kazuhiro Ogata, Chiaki Ohtaka-Maruyama, Naomichi Matsumoto.(2021) De novo ATP1A3 variants cause polymicrogyria. Sci Adv. 2021 Mar 24;7(13):eabd2368. doi: 10.1126/sciadv.abd2368. Print 2021 Mar.
( 04/05/2021 )

Tamako Nishimura, Takuya Oyama, Hooi Ting Hu, Toshifumi Fujioka, Kyoko Hanawa-Suetsugu, Kazutaka Ikeda, Sohei Yamada, Hiroki Kawana, Daisuke Saigusa, Hiroki Ikeda, Rie Kurata, Kayoko Oono-Yakura, Manabu Kitamata, Kazuki Kida, Tomoya Hikita, Kiyohito Mizutani, Kazuma Yasuhara, Yuko Mimori-Kiyosue, Chitose Oneyama, Kazuki Kurimoto, Yoichiroh Hosokawa, Junken Aoki, Yoshimi Takai, Makoto Arita, Shiro Suetsugu. (2021) Filopodium-derived vesicles produced by MIM enhance the migration of recipient cells. Dev Cell. 2021 Mar 22;56(6):842-859.e8. doi: 10.1016/j.devcel.2021.02.029.
( 04/05/2021 )

Edy Meiyanto, Ulfatul Husnaa, Ria Fajarwati Kastian, Herwandhani Putri, Yonika Arum Larasati, Annisa Khumaira, Dyaningtyas Dewi Putri Pamungkas, Riris Istighfari Jenie, Masashi Kawaichi, Beni Lestari, Takashi Yokoyama, Jun-Ya Kato.(2021) The Target Differences of Anti-Tumorigenesis Potential of Curcumin and its Analogues Against HER-2 Positive and Triple-Negative Breast Cancer Cells. Adv Pharm Bull. 2021 Jan;11(1):188-196. doi: 10.34172/apb.2021.020. Epub 2020 Nov 7.
( 04/05/2021 )

Supanji Supanji, Dewi Fathin Romdhoniyyah, Muhammad Bayu Sasongko, Angela Nurini Agni, Firman Setya Wardhana, Tri Wahyu Widayanti, Muhammad Eko Prayogo, Ayudha Bahana Ilham Perdamaian, Aninditta Dianratri, Masashi Kawaichi, Chio Oka.(2021) Associations of ARMS2 and CFH Gene Polymorphisms with Neovascular Age-Related Macular Degeneration. Clin Ophthalmol. 2021 Mar 11;15:1101-1108. doi: 10.2147/OPTH.S298310. eCollection 2021.
( 04/05/2021 )

Yoshinori Hirano, Yong-Guang Gao, Dhirendra K Simanshu, Daniel J Stephenson, Ngoc T Vu, Lucy Malinina, Charles E Chalfant, Dinshaw J Patel, Rhoderick E Brown. (2021) Purification of Cytosolic Phospholipase A 2 α C2-domain after Expression in Soluble Form in Escherichia coli. Bio Protoc. 2021 Feb 5;11(3):e3906. doi: 10.21769/BioProtoc.3906.
( 04/05/2021 )

Akie Shimotohno, Shiori S Aki, Naoki Takahashi, Masaaki Umeda.(2021) Regulation of the Plant Cell Cycle in Response to Hormones and the Environment. Annu Rev Plant Biol. 2021 Mar 9. doi: 10.1146/annurev-arplant-080720-103739. Online ahead of print.
( 04/05/2021 )

Keiji Nakajima. (2021) GELP, not just any boundary. Nat Plants. 2021 Mar;7(3):248-249. doi: 10.1038/s41477-021-00882-5.
( 04/05/2021 )

Ayaka Shimoki, Satoru Tsugawa, Keiichiro Ohashi, Masahito Toda, Akiteru Maeno, Tomoaki Sakamoto, Seisuke Kimura, Takashi Nobusawa, Mika Nagao, Eiji Nitasaka, Taku Demura, Kiyotaka Okada, Seiji Takeda. Reduction in organ-organ friction is critical for corolla elongation in morning glory. Commun Biol. 2021 Mar 5;4(1):285. doi: 10.1038/s42003-021-01814-x.
( 04/05/2021 )

Yuki Yoshikawa, Ryo Nasuno, Hiroshi Takagi. (2021) A reduced form of nicotinamide adenine dinucleotide phosphate-independent mechanism enhances oxidative and nitrosative stress tolerance in yeast cells lacking glucose-6-phosphate dehydrogenase activity. Yeast. 2021 Mar 1. doi: 10.1002/yea.3558. Online ahead of print.
( 04/05/2021 )

Manami Toriyama, Ken J Ishii. (2021) Primary Cilia in the Skin: Functions in Immunity and Therapeutic Potential. Front Cell Dev Biol. 2021 Feb 11;9:621318. doi: 10.3389/fcell.2021.621318. eCollection 2021.
( 04/05/2021 )

Margaret Anne Pelayo, Nobutoshi Yamaguchi, Toshiro Ito.(2021) One factor, many systems: the floral homeotic protein AGAMOUS and its epigenetic regulatory mechanisms. Curr Opin Plant Biol. 2021 Feb 25;61:102009. doi: 10.1016/j.pbi.2021.102009. Online ahead of print.
( 04/05/2021 )

March, 2021

Elisa Schulz , Takayuki Tohge, J Barbro Winkler, Andreas Albert , Anton R Schäffner, Alisdair R Fernie, Ellen Zuther, Dirk K Hincha.(2021) Natural Variation among Arabidopsis Accessions in the Regulation of Flavonoid Metabolism and Stress Gene Expression by Combined UV Radiation and Cold. Plant Cell Physiol. 2021 Feb 5;pcab013. doi: 10.1093/pcp/pcab013. Online ahead of print.
( 03/03/2021 )

Haruna Okude, Daisuke Ori, Taro Kawai. (2021) Signaling Through Nucleic Acid Sensors and Their Roles in Inflammatory Diseases. Front Immunol. 2021 Jan 28;11:625833. doi: 10.3389/fimmu.2020.625833. eCollection 2020
( 03/01/2021 )

Motohiro Fujiwara, Tatsuaki Goh, Satoru Tsugawa, Keiji Nakajima, Hidehiro Fukaki, Koichi Fujimoto. (2021) Tissue growth constrains root organ outlines into an isometrically scalable shape. Development. 2021 Feb 26;148(4):dev196253. doi: 10.1242/dev.196253.
( 03/01/2021 )

Quynh Giang Le, Yuki Ishiwata-Kimata, Thi Huong Phuong, Shigeto Fukunaka, Kenji Kohno, Yukio Kimata. (2021) The ADP-binding kinase region of Ire1 directly contributes to its responsiveness to endoplasmic reticulum stress. Sci Rep. 2021 Feb 24;11(1):4506. doi: 10.1038/s41598-021-83890-x.
( 03/01/2021 )

Ryoya Tanahashi, Tomonori Matsushita, Akira Nishimura, Hiroshi Takagi. (2021) Downregulation of the broad-specificity amino acid permease Agp1 mediated by the ubiquitin ligase Rsp5 and the arrestin-like protein Bul1 in yeast. Biosci Biotechnol Biochem. 2021 Feb 23;zbab028. doi: 10.1093/bbb/zbab028. Online ahead of print.
( 03/01/2021 )

Masaru Nakayasu, Kohei Ohno, Kyoko Takamatsu, Yuichi Aoki, Shinichi Yamazaki, Hisabumi Takase, Tsubasa Shoji, Kazufumi Yazaki, Akifumi Sugiyama. (2021) Tomato roots secrete tomatine to modulate the bacterial assemblage of the rhizosphere. Plant Physiol. 2021 Feb 23;kiab069. doi: 10.1093/plphys/kiab069. Online ahead of print.
( 03/01/2021 )

Makoto Shirakawa, Yukaho Morisaki, Eng-Seng Gan, Ayato Sato, Toshiro Ito. (2021) Identification of a Devernalization Inducer by Chemical Screening Approaches in Arabidopsis thaliana. Front Plant Sci. 2021 Feb 4;12:634068. doi: 10.3389/fpls.2021.634068. eCollection 2021.
( 03/01/2021 )

Ryo Nasuno, Yuki Yoshikawa, Hiroshi Takagi. (2021) The analytical method to identify the nitrogen source for nitric oxide synthesis. Biosci Biotechnol Biochem. 2021 Feb 18;85(2):211-214. doi: 10.1093/bbb/zbaa046.
( 03/01/2021 )

Rezwana Ahmed, Yasukazu Nakahata, Kazuyuki Shinohara, Yasumasa Bessho. (2021) Cellular Senescence Triggers Altered Circadian Clocks With a Prolonged Period and Delayed Phases. Front Neurosci. 2021 Jan 25;15:638122. doi: 10.3389/fnins.2021.638122. eCollection 2021.
( 03/01/2021 )

Toru Jojima, Takafumi Igari, Ryoji Noburyu, Akira Watanabe, Masako Suda, Masayuki Inui. (2021) Coexistence of the Entner-Doudoroff and Embden-Meyerhof-Parnas pathways enhances glucose consumption of ethanol-producing Corynebacterium glutamicum. Biotechnol Biofuels. 2021 Feb 16;14(1):45. doi: 10.1186/s13068-021-01876-3.
( 03/01/2021 )

Shosuke Yoshida, Kazumi Hiraga, Ikuo Taniguchi, Kohei Oda. (2021) Ideonella sakaiensis, PETase, and MHETase: From identification of microbial PET degradation to enzyme characterization. Methods Enzymol. 2021;648:187-205. doi: 10.1016/bs.mie.2020.12.007. Epub 2021 Jan 9.
( 03/01/2021 )

Shiori S Aki, Kei Yura, Takashi Aoyama, Tomohiko Tsuge.(2021) SAP130 and CSN1 interact and regulate male gametogenesis in Arabidopsis thaliana. J Plant Res. 2021 Feb 8. doi: 10.1007/s10265-021-01260-0. Online ahead of print.
( 03/01/2021 )

Tomoyuki Fukuda, Fajar Sofyantoro, Yen Teng Tai, Kim Hou Chia, Takato Matsuda, Takaaki Murase, Yuichi Morozumi, Hisashi Tatebe, Tomotake Kanki, Kazuhiro Shiozaki.(2021) Tripartite suppression of fission yeast TORC1 signaling by the GATOR1-Sea3 complex, the TSC complex, and Gcn2 kinase. Elife. 2021 Feb 3;10:e60969. doi: 10.7554/eLife.60969.
( 03/01/2021 )

Masaaki Umeda, Momoko Ikeuchi, Masaki Ishikawa, Toshiro Ito, Ryuichi Nishihama, Junko Kyozuka, Keiko U Torii, Akiko Satake, Gohta Goshima, Hitoshi Sakakibara.(2021) Plant stem cell research is uncovering the secrets of longevity and persistent growth. Plant J. 2021 Feb 3. doi: 10.1111/tpj.15184. Online ahead of print.
( 03/01/2021 )

February, 2021

René Schneider, Kris Van't Klooster, Kelsey L Picard, Jasper van der Gucht, Taku Demura, Marcel Janson, Arun Sampathkumar, Eva E Deinum, Tijs Ketelaar, Staffan Persson.(2021) Long-term single-cell imaging and simulations of microtubules reveal principles behind wall patterning during proto-xylem development Nat Commun. 2021 Jan 28;12(1):669. doi: 10.1038/s41467-021-20894-1.
( 02/02/2021 )

Ayame Imoto, Mizuki Yamada, Takumi Sakamoto, Airi Okuyama, Takashi Ishida, Shinichiro Sawa, Mitsuhiro Aida.(2021) A ClearSee-Based Clearing Protocol for 3D Visualization of Arabidopsis thaliana Embryos Plants (Basel). 2021 Jan 20;10(2):E190. doi: 10.3390/plants10020190.
( 02/02/2021 )

Sara Sheibani, Kaustuv Basu, Ali Farnudi, Aliakbar Ashkarran, Muneyoshi Ichikawa, John F Presley, Khanh Huy Bui, Mohammad Reza Ejtehadi, Hojatollah Vali, Morteza Mahmoudi.(2021) Nanoscale characterization of the biomolecular corona by cryo-electron microscopy, cryo-electron tomography, and image simulation Nat Commun. 2021 Jan 25;12(1):573. doi: 10.1038/s41467-020-20884-9.
( 02/02/2021 )

Justyna Jadwiga Olas, Federico Apelt, Mutsumi Watanabe, Rainer Hoefgen, Vanessa Wahl.(2021) Developmental stage-specific metabolite signatures in Arabidopsis thaliana under optimal and mild nitrogen limitation Plant Sci. 2021 Feb;303:110746. doi: 10.1016/j.plantsci.2020.110746. Epub 2020 Nov 19.
( 02/02/2021 )

Sun-Yong Kim, Tomoyuki Mori, Min Fey Chek, Shunji Furuya, Ken Matsumoto, Taisei Yajima, Toshihiko Ogura, Toshio Hakoshima.(2021) Structural insights into vesicle amine transport-1 (VAT-1) as a member of the NADPH-dependent quinone oxidoreductase family Sci Rep . 2021 Jan 22;11(1):2120. doi: 10.1038/s41598-021-81409-y.
( 02/02/2021 )

Defri Rizaldy, Manami Toriyama, Hiroko Kato, Runa Fukui, Fumitaka Fujita, Motoki Nakamura, Fumihiro Okada, Akimichi Morita, Ken J Ishii.(2021) Increase in primary cilia in the epidermis of patients with atopic dermatitis and psoriasis Exp Dermatol . 2021 Jan 17. doi: 10.1111/exd.14285. Online ahead of print.
( 02/02/2021 )

Yuichi Morozumi, Kazuhiro Shiozaki.(2021) Conserved and Divergent Mechanisms That Control TORC1 in Yeasts and Mammals Genes (Basel). 2021 Jan 12;12(1):88. doi: 10.3390/genes12010088.
( 02/02/2021 )

Naoyuki Tahara, Ryutaro Akiyama, Justin Wang, Hiroko Kawakami, Yasumasa Bessho, Yasuhiko Kawakami.(2021) The FGF-AKT pathway is necessary for cardiomyocyte survival for heart regeneration in zebrafish Dev Biol. 2021 Jan 11;472:30-37. doi: 10.1016/j.ydbio.2020.12.019. Online ahead of print.
( 02/02/2021 )

Mutsumi Kimura, Ryo Sumida, Ayata Kurasaki, Takahito Imai, Yuta Takishita, Yasuhiko Nakashima.(2021) Amorphous metal oxide semiconductor thin film, analog memristor, and autonomous local learning for neuromorphic systems Sci Rep. 2021 Jan 12;11(1):580. doi: 10.1038/s41598-020-79806-w.
( 02/02/2021 )

January, 2021

Pablo Barbeito, Yuki Tachibana, Raquel Martin-Morales, Paula Moreno, Kirk Mykytyn, Tetsuo Kobayashi, Francesc R Garcia-Gonzalo. (2020) HTR6 and SSTR3 ciliary targeting relies on both IC3 loops and C-terminal tails. Life Sci Alliance. 2020 Dec 28;4(3):e202000746. doi: 10.26508/lsa.202000746. Print 2021 Mar.
( 01/05/2021 )

Jinfeng Wu, Mingli Yan, Dawei Zhang, Dinggang Zhou, Nobutoshi Yamaguchi, Toshiro Ito. (2020) Histone Demethylases Coordinate the Antagonistic Interaction Between Abscisic Acid and Brassinosteroid Signaling in Arabidopsis. Front Plant Sci. 2020 Nov 25;11:596835. doi: 10.3389/fpls.2020.596835. eCollection 2020.
( 01/05/2021 )

Ken-Ichi Miyazono, Tomoko Ito, Yui Fukatsu, Hikaru Wada, Akira Kurisaki, Masaru Tanokura. (2020) Structural basis for transcriptional coactivator recognition by SMAD2 in TGF-β signaling. Sci Signal. 2020 Dec 15;13(662):eabb9043. doi: 10.1126/scisignal.abb9043.
( 01/05/2021 )

Shayan Sarkar, Natalia Stefanik, Tadashi Kunieda, Ikuko Hara-Nishimura, Kenji Yamada. (2020) The Arabidopsis transcription factor NAI1 activates the NAI2 promoter by binding to the G-box motifs. Plant Signal Behav. 2020 Dec 14;1846928. doi: 10.1080/15592324.2020.1846928. Online ahead of print.
( 01/05/2021 )

Yukun Wang, Hong Ye, Jianfang Bai, Fei Ren. (2020) The regulatory framework of developmentally programmed cell death in floral organs: A review. Plant Physiol Biochem. 2021 Jan;158:103-112. doi: 10.1016/j.plaphy.2020.11.052. Epub 2020 Dec 5
( 01/05/2021 )

Chuansong Zhan, Long Lei, Zixin Liu, Shen Zhou, Chenkun Yang, Xitong Zhu, Hao Guo, Feng Zhang, Meng Peng, Meng Zhang, Yufei Li, Zixin Yang, Yangyang Sun, Yuheng Shi, Kang Li, Ling Liu, Shuangqian Shen, Xuyang Wang, Jiawen Shao, Xinyu Jing, Zixuan Wang, Yi Li, Tomasz Czechowski, Morifumi Hasegawa, Ian Graham, Takayuki Tohge, Lianghuan Qu, Xianqing Liu, Alisdair R Fernie, Ling-Ling Chen, Meng Yuan, Jie Luo. (2020) Selection of a subspecies-specific diterpene gene cluster implicated in rice disease resistance. Nat Plants. 2020 Dec;6(12):1447-1454. doi: 10.1038/s41477-020-00816-7. Epub 2020 Dec 7.
( 01/05/2021 )

Eleftheria Roumeli, Leah Ginsberg, Robin McDonald, Giada Spigolon, Rodinde Hendrickx, Misato Ohtani, Taku Demura, Guruswami Ravichandran, Chiara Daraio. (2020) Structure and Biomechanics during Xylem Vessel Transdifferentiation in Arabidopsis thaliana. Plants (Basel). 2020 Dec 5;9(12):1715. doi: 10.3390/plants9121715.
( 01/05/2021 )

Daishin Ueno, Maki Mikami, Shotaro Yamasaki, Miho Kaneko, Takafumi Mukuta, Taku Demura, Ko Kato. (2020) Changes in mRNA degradation efficiencies under varying conditions are regulated by multiple determinants in Arabidopsis thaliana. Plant Cell Physiol. 2020 Dec 8;pcaa147. doi: 10.1093/pcp/pcaa147. Online ahead of print.
( 01/05/2021 )

Noriaki Sasai, Minori Kadoya, Agnes Ong Lee Chen. (2020) Neural induction: Historical views and application to pluripotent stem cells. Dev Growth Differ. 2020 Dec 2. doi: 10.1111/dgd.12703. Online ahead of print.
( 01/05/2021 )

Leia Colin, Antoine Chevallier, Satoru Tsugawa, Florian Gacon, Christophe Godin, Virgile Viasnoff, Timothy E Saunders, Olivier Hamant. (2020) Cortical tension overrides geometrical cues to orient microtubules in confined protoplasts. Proc Natl Acad Sci U S A. 2020 Dec 7;202008895. doi: 10.1073/pnas.2008895117. Online ahead of print.
( 01/05/2021 )