Publications

2012 | 2013 | 2014 | 2015 | 2016 | 2017

2014 achievement

Project member :A01Demura, T.
Author’s name :Schuetz M, Benske A, Smith RA, Watanabe Y, Tobimatsu Y, Ralph J, Demura T, Ellis B, Samuels AL.
Published year :2014
Title :Laccases direct lignification in the discrete secondary cell wall domains of protoxylem.
Journal/Book :Plant Physiol. 166, 798-807.
Project member :A01Ishizaki, K.
Author’s name :Komatsu, A., Terai, M., Ishizaki, K., Suetsugu, N., Tsuboi, H., Nishihama, R., Yamato, K.T., Wada, M. and Kohchi, T.
Published year :2014
Title :Phototropin encoded by a single-copy gene mediates chloroplast photorelocation movements in the liverwort Marchantia polymorpha L.
Journal/Book :Plant Physiol. 166: 411-427
Project member :A01Ishizaki, K.
Author’s name :Kihara, H., Tanaka, M., Yamato, K.T., Horibara, A., Yamada, A., Kita, S., Ishizaki, K., Kajikawa, M., Fukuzawa, H., Kohchi, T. Akakabe, Y. and Matsui, K.
Published year :2014
Title :Arachidonic acid-dependent carbon-eight volatile synthesis from wounded liverwort (Marchantia polymorpha).
Journal/Book :Phytochemistry 107: 42-49 (2014)
Project member :A03Sawa, S. / Aida, M
Author’s name :Ishida, T., Tabata, R., Yamada, M., Aida, M., Mitsumasu, K., Fujiwara, M., Yamaguchi, K., Shigenobu, S., Higuchi, M., Tsuji, H., Shimamoto, K., Hasebe, M., Fukuda, H., Sawa, S.
Published year :2014
Title :Heterotrimeric G proteins control stem cell proliferation through CLAVATA signaling in Arabidopsis.
Journal/Book :EMBO rep. 15.1202-1209
Project member :A01A02Yamaguchi M, Yoneda A, Demura T. / Ohtani M
Author’s name :Endo H, Yamaguchi M, Tamura T, Nakano Y, Nishikubo N, Yoneda A, Kato K, Kubo M, Kajita S, Katayama Y, Ohtani M, Demura T.
Published year :2014
Title :Multiple Classes of Transcription Factors Regulate the Expression of VASCULAR-RELATED NAC-DOMAIN7, a Master Switch of Xylem Vessel Differentiation.
Journal/Book :Plant Cell Physiol. doi: 10.1093/pcp/pcu134
Project member :A02Miwa,K.
Author’s name :Aibara I., Miwa K.
Published year :2014
Title :Strategies for Optimization of Mineral Nutrient Transport in Plants: Multilevel Regulation of Nutrient-Dependent Dynamics of Root Architecture and Transporter Activity
Journal/Book :Plant Cell Physiol. doi: 10.1093/pcp/pcu156
Project member :A03Sawa, S.
Author’s name :Maeda, S., Gunji, S., Hanai, K., Hirano, T., Kazama, Y., Ohbayashi, I., Abe, T., Sawa, S., Tsukaya, H., Ferjani, A.
Published year :2014
Title :The Conflict between Cell Proliferation and Expansion Primarily Affects Stem Organogenesis in Arabidopsis.
Journal/Book :Plant Cell Physiol. 55. 1994-2007
Project member :A03Yamaguchi,S. / Seto,Y.
Author’s name : Abe,S., Sado,A., Tanaka,K., Kisugi, T., Asami, K., Ota,S., Kim,H., Yoneyama, K., Xie,X., Ohnishi,T., Seto,Y., Yamaguchi,S., Akiyama,K.,Yoneyama,K., Nomura,T.
Published year :2014
Title :Carlactone is converted to carlactonoic acid by MAX1 in Arabidopsis and its methyl ester can directly interact with AtD14 in vitro
Journal/Book :Proc. Natl. Acad. Sci. USA doi: 10.1073/pnas.1410801111
Project member :A02Higaki, T. / Hasezawa, S.
Author’s name :Higaki T, Hashimoto-Sugimoto M, Akita K, Iba K, Hasezawa S
Published year :2014
Title :Dynamics and environmental responses of PATROL1 in Arabidopsis subsidiary cells.
Journal/Book :Plant Cell Physiol. 55: 773-80. doi: 10.1093/pcp/pct151
Project member :A02Hasezawa, S.
Author’s name :Nomura T, Itouga M, Kojima M, Kato Y, Sakakibara H, Hasezawa S
Published year :2014
Title :Copper mediates auxin signalling to control cell differentiation in the copper moss Scopelophila cataractae.
Journal/Book :J. Exp. Bot. in press. doi: 10.1093/jxb/eru470
Project member :A01A02Fujimoto,M. / Kutsuna, N.
Author’s name :Naramoto S, Otegui MS, Kutsuna N, de Rycke R, Dainobu T, Karampelias M, Fujimoto M, Feraru E, Miki D, Fukuda H, Nakano A, Friml J
Published year :2014
Title :Insights into the localization and function of the membrane trafficking regulator GNOM ARF-GEF at the Golgi apparatus in Arabidopsis.
Journal/Book :Plant Cell 26: 3062-3076. doi:10.1105/tpc.114.125880
Project member :A02Kutsuna, N.
Author’s name :Kobayashi S, Kutsuna N, Tanino KK, Uemura M, Kawamura Y
Published year :2014
Title :Confocal cryomicroscopic analysis and cryodynamics of endoplasmic reticulum in herbaceous plant cells.
Journal/Book :Environ. Exp. Bot. 106: 44-51. doi:10.1016/j.envexpbot.2014.02.002
Project member :A02Kutsuna, N.
Author’s name :Motomura K, Le Q, Kutsuna N, Mano S, Nishimura M, Hamada T,Watanabe Y
Published year :2014
Title :Diffuse DCP2 accumulates in DCP1 foci under heat stress in Arabidopsis thaliana.
Journal/Book :Plant Cell Physiol. doi:10.1093/pcp/pcu151
Project member :A02Hasezawa S
Author’s name :Akita K, Hasezawa S
Published year :2014
Title :Sugar Solution Induces Clustered Lips.
Journal/Book :Cytologia 79: 125-126 doi: org/10.1508/cytologia.79.12
Project member :A02Hasezawa, S.
Author’s name :Kojo KH, Yasuhara H, Hasezawa S
Published year :2014
Title :Time-sequential observation of spindle and phragmoplast orientation in BY-2 cells with altered cortical actin microfilament patterning.
Journal/Book :Plant Signal. Behav. 18:9. e29579. doi: 10.4161/psb.29579
Project member :A02Obayashi, T.
Author’s name :Okamura,Y., Aoki,Y., Obayashi, T., Tadaka,S., Ito,S., Narise,T., Kinoshita,K.
Published year :2014
Title :COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems
Journal/Book :Nucl. Acids Res. doi: 10.1093/nar/gku1163
Project member :A03Hayashi,K.
Author’s name :Haga K., Hayashi K., Sakai T.
Published year :2014
Title :PINOID AGC Kinases are Necessary for Phytochrome-Mediated Enhancement of Hypocotyl Phototropism in Arabidopsis.
Journal/Book :Plant Physiol. October 2014 pp.114.244434
Project member :A03Kawasaki, T.
Author’s name :Ishikawa, K., Yamaguchi, K., Sakamoto, K., Yoshimura, S., Inoue, K., Tsuge, S., Kojima, C., Kawasaki, T.
Published year :2014
Title :Bacterial effector modulation of host E3 ligase activity suppresses PAMP-triggered immunity in rice
Journal/Book :Nat. Commun. 5: 5430
Project member :A02A03Kuchitsu, K. / Kanaoka M.M.
Author’s name :Kaya H, Iwano M, Takeda S, Kanaoka MM, Kimura S, Abe M, Kuchitsu K
Published year :2014
Title :Apoplastic ROS production upon pollination by RbohH and RbohJ in Arabidopsis.
Journal/Book :Plant Signal. Behav. 10:e989050. doi: 10.4161/15592324.2014.989050.
Project member :A02Kuchitsu, K.
Author’s name :Hanamata S, Kurusu T, Kuchitsu K
Published year :2014
Title :Roles of autophagy in male reproductive development in plants.
Journal/Book :Front. Plant Sci. in press
Project member :A02Kuchitsu, K.
Author’s name :Kishimoto T, Yamazaki H,Saruwatari A, Murakawa H, Sekozawa Y, Kuchitsu K, Price WS, Ishikawa M
Published year :2014
Title :High ice nucleation activity located in blueberry stem bark is linked to primary freeze initiation and adaptive freezing behavior of the bark.
Journal/Book :AoB PLANTS 6:plu044 doi:10.1093/aobpla/plu044
Project member :A02Kuchitsu, K.
Author’s name :Hamada H, Kurusu T, Nokajima H, Kiyoduka M, Yano K, Kuchitsu K
Published year :2014
Title :Regulation of xylanase elicitor-induced expression of defense-related genes involved in phytoalexin biosynthesis by a cation channel OsTPC1 in suspension-cultured rice cells.
Journal/Book :Plant Biotechnol. 31, 329–334
Project member :A02Kuchitsu, K.
Author’s name :Kärkönen A, Kuchitsu K
Published year :2014
Title :Reactive oxygen species in cell wall metabolism and development in plants.
Journal/Book :Phytochemistry 112:22-32 doi: 10.1016/j.phytochem.2014.09.016
Project member :A02Satoh,S. / Iwai,H
Author’s name :Sumiyoshi, M., Inamura, T., Nakamura, A., Aohara, T., Ishii, T., Satoh, S., Iwai, H.
Published year :2014
Title :UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa).
Journal/Book :Plant Cell Physiol. doi: 10.1093/pcp/pcu132
Project member :A03Suzaki, T.
Author’s name :Sasaki, T., Suzaki, T., Soyano, T., Kojima, M., Sakakibara, H., Kawaguchi, M.
Published year :2014
Title :Shoot-derived cytokinins systemically regulate root nodulation.
Journal/Book :Nat. Commun. 5: 4983.
Project member :A03Suzaki, T.
Author’s name :Daum, G., Medzihradszky, A., Suzaki, T., Lohmann J.U.
Published year :2014
Title :A mechanistic framework for noncell autonomous stem cell induction in Arabidopsis.
Journal/Book :Proc. Natl. Acad. Sci. USA 111: 14619–14624 doi: 10.1073/pnas.1406446111
Project member :A03Suzaki, T.
Author’s name :Suzaki, T., Kawaguchi, M.
Published year :2014
Title :Root nodulation: a developmental program involving cell fate conversion triggered by symbiotic bacterial infection.
Journal/Book :Curr. Opin. Plant Biol. 21: 16-22.
Project member :A03Shibuya,N.
Author’s name :Miyata,K., Kozaki,T., Kouzai,Y., Ozawa,K., Ishii,K., Asamizu,E., Okabe,Y., Umehara,Y., Miyamoto,A., Kobae,Y., Akiyama,K., Kaku,H., Nishizawa,Y., Shibuya, N., Nakagawa.T.
Published year :2014
Title :Bifunctional plant receptor, OsCERK1, regulates both chitin- triggered immunity and arbuscular mycorrhizal symbiosis in rice.
Journal/Book :Plant Cell Physiol. doi:10.1093/pcp/ pcu129.
Project member :A03Shibuya,N.
Author’s name :Kouzai,Y., Mochizuki,S, Nakajima,K., Desaki,Y., Hayafune,M., Miyazaki,H., Yokotani,N., Ozawa,K., Minami,E., Kaku,H., Shibuya,N., Nishizawa,Y.
Published year :2014
Title :Targeted gene disruption of OsCERK1 reveals its indispensable role in chitin perception and involvement in the peptidoglycan response and immunity in rice.
Journal/Book :Mol. Plant-Microbe Int. 27: 975-982 doi/org/10.1094/MPMI-03- 14-0068-R
Project member :A03Tominaga-Wada, R. / Wada,T.
Author’s name : Wada,T., Kunihiro, A.,Tominaga-Wada, R.
Published year :2014
Title :Arabidopsis CAPRICE (MYB) and GLABRA3 (bHLH) Control Tomato (Solanum lycopersicum) Anthocyanin Biosynthesis
Journal/Book :PLoS ONE 9:9: e109093 doi: 10.1371/journal.pone.010909
Project member :A03Kawasaki, T.
Author’s name :Kosami, K., Ohki, I., Nagano, M., Furuita, K., Sugiki, T., Kawano, Y., Kawasaki, T., Fujiwara, T., Nakagawa, A., Shimamoto, K., Kojima, C.
Published year :2014
Title :The crystal structure of the plant small GTPase OsRac1 reveals its mode of binding to NADPH oxidase
Journal/Book :J. Biol. Chem., 289: 28569-28578
Project member :A02Kutsuna, N., Higaki, T., Hasezawa, S.
Author’s name :Toyooka, K., Sato, M., Kutsuna, N., Higaki, T., Sawaki, F., Wakazaki, M., Goto, Y., Hasezawa, S., Nagata, N., Matsuoka, K.
Published year :2014
Title :Wide-Range High-Resolution Transmission Electron Microscopy Reveals Morphological and Distributional Changes of Endomembrane Compartments during Log to Stationary Transition of Growth Phase in Tobacco BY-2 Cells
Journal/Book :Plant Cell Physiol. 55:1544-1555
Project member :A01Oda, Y.
Author’s name :Ohashi-Ito K, Saegusa M, Iwamoto K, Oda Y, Katayama H, Kojima M, Sakakibara H, Fukuda H.
Published year :2014
Title :A bHLH Complex Activates Vascular Cell Division via Cytokinin Action in Root Apical Meristem.
Journal/Book :Curr Biol 24, 2053-2058 doi: 10.1016/j.cub.2014.07.050.
Project member :A01Oda, Y.
Author’s name :Oda Y, Fukuda H
Published year :2014
Title :Emerging roles of small GTPases in secondary cell wall development.
Journal/Book :Front. in Plant Sci. 5:428 doi: 10.3389/fpls.2014.00428.
Project member :A03Hayashi,K.
Author’s name :Hayashi K, Nakamura S, Fukunaga S, Nishimura T, Jenness MK, Murphy AS, Motose H, Nozaki H, Furutani M, Aoyama T
Published year :2014
Title :Auxin transport sites are visualized in planta using fluorescent auxin analogs
Journal/Book :Proc. Nat. Acad. Sci. U.S.A. 111:11557–11562 doi: 10.1073/pnas.1408960111
Project member :A03Hayashi,K.
Author’s name :Shimane M, Ueno Y, Morisaki K, Oogami S, Natsume M, Hayashi K, Nozaki H,
Published year :2014
Title :Molecular evolution of the substrate specificity of ent-kaurene synthases to adapt to gibberellin biosynthesis in land plants.
Journal/Book :Biochem J. 462: 539–546 doi:10.1042/BJ20140134
Project member :A02Igarashi, K.
Author’s name :Matsumura,H., Umezawa,K., Takeda,K., Sugimoto,N., IshidaT., Samejima,M., Ohno,H., Yoshida,M., Igarashi,K., Nakamura,M.
Published year :2014
Title :Discovery of a Eukaryotic Pyrroloquinoline Quinone-Dependent Oxidoreductase Belonging to a New Auxiliary Activity Family in the Database of Carbohydrate-Active Enzymes
Journal/Book :PLoS One doi: 10.1371/journal.pone.0104851
Project member :A02A03Kuchitsu, K. / Kanaoka M.M.
Author’s name :Kaya, H., Nakajima R, Iwano, M., Kanaoka, M.M., Kimura, S., Takeda, S., Kawarazaki. T., Senzaki, E., Hamamura, Y., Higashiyama, T., Takayama, S., Abe, M., *Kuchitsu, K.
Published year :2014
Title :Ca2+-activated ROS production by Arabidopsis RbohH and RbohJ is essential for proper pollen tube tip growth.
Journal/Book :Plant Cell 26: 1069-1080
Project member :A02Satoh, S. / Nishitani, K. / Iwai, H. / Yokoyama, R.
Author’s name :Pitaksaringkarn, W., Matsuoka, K., Asahina, M., Miura, K., Sage-Ono, K., Ono, M., Yokoyama, R., Nishitani, K., Ishii, T., Iwai, H., Satoh, S.
Published year :2014
Title :XTH20 and XTH19 regulated by ANAC071 under auxin flow are involved in cell proliferation in incised Arabidopsis inflorescence stems.
Journal/Book :Plant J. doi: 10.1111/tpj.12654
Project member :A01Fujiwara, T.
Author’s name :Hanaoka, H., Uraguchi, S., Takano, J., Tanaka, M., *Fujiwara, T.
Published year :2014
Title :OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions.
Journal/Book :Plant J. 78: 890–902
Project member :A01Fujiwara, T.
Author’s name :Yamashita, Y., Kadokura, Y., Sotta, N., Fujiwara, T., Takigawa, I., Satake, A., Onouchi, H., Naito, S.
Published year :2014
Title :Ribosomes in a Stacked Array Elucidation of the step in translation elongation at which they are stalled during S-adenosyl-L-methionine-induced translation arrest of CGS1 mRNA
Journal/Book :J. Biol. Chem. 289:12693-12704
Project member :A01Kakugo, A.
Author’s name :Kabir, A., Inoue, D., Hamano, Y., Mayama, H., Sada, K., Kakugo, A.
Published year :2014
Title :Biomolecular motor modulates mechanical property of microtubule
Journal/Book :Biomacromolecules 15: 1797–1805
Project member :A03Yamaguchi,S.
Author’s name :Ha, C.V., Leyva-González, M.A., Osakabe, Y., Tran, U.T., Nishiyama, R., Watanabe, Y., Tanaka, M., Seki, M., Yamaguchi, S., Dong, N.V., Yamaguchi-Shinozaki, K., Shinozaki, K., *Herrera-Estrella, L., *Tran, L.S.
Published year :2014
Title :Positive regulatory role of strigolactone in plant responses to drought and salt stress.
Journal/Book :Proc Natl Acad Sci U S A. 111: 851-856
Project member :A03Yamaguchi,S.
Author’s name :Bou-Torrent, J., Galstyan, A., Gallemí, M., Cifuentes-Esquivel, N., Molina-Contreras, M.J., Salla-Martret, M., Jikumaru, Y., Yamaguchi, S., Kamiya, Y., *Martínez-García, J.F.
Published year :2014
Title :Plant proximity perception dynamically modulates hormone levels and sensitivity in Arabidopsis.
Journal/Book :J Exp Bot. 65: 2937-2947.
Project member :A01Sasabe,M.
Author’s name :Tanaka, H., Nodzyłski, T., Kitakura, S., Feraru, M.I., Sasabe, M., Ishikawa, T., Kleine-Vehn, J., Kakimoto, T., Friml, J.
Published year :2014
Title :BEX1/ARF1A1C is Required for BFA-Sensitive Recycling of PIN Auxin Transporters and Auxin-Mediated Development in Arabidopsis.
Journal/Book :Plant Cell Physiol. 55: 737-749
Project member :A03Hayashi,K.
Author’s name :Hayashi K, Kinnoshita T
Published year :2014
Title :Plant signaling: Abscisic acid receptor hole-in-one
Journal/Book :Nat. Chem. Biol. 10: 414-415
Project member :A01Ueda, T.
Author’s name :Cui, Y., Zhao, Q., Gao, C., DingY., Zeng, Y., Ueda, T., Nakano, A., Jiang, L.
Published year :2014
Title :Activation of the Rab7 GTPase by theMON1-CCZ1 Complex Is Essential for PVC-to-Vacuole Trafficking and Plant Growth in Arabidopsis
Journal/Book :Plant Cell 26: 2080-2097
Project member :A01Fujiwara, T.
Author’s name :Uehara, M., Wang, S., Kamiya, T., Shigenobu, S., Yamaguchi, K., Fujiwara, T., Naito, S., Takano, J.
Published year :2014
Title :Identification and characterization of an Arabidopsis mutant with altered localization of NIP5;1, a plasma membrane boric acid channel, reveals the requirement for D-galactose in endomembrane organization
Journal/Book :Plant Cell Physiol. 2014 55:704-14
Project member :A02Igarashi, K / Uchihashi, T
Author’s name :Shibafuji, Y., Nakamura, A., Uchihashi, T., Sugimoto, N., Fukuda, S., Watanabe, H., Samejima, M., Ando, A., Noji, H., Koivula, A., Igarashi, K., Iino, R.
Published year :2014
Title :Single-molecule imaging analysis of elementary reaction steps of Trichoderma Reesei cellobiohydrolase I (Cel7A) hydrolyzing crystalline cellulose Iα and IIII
Journal/Book :J. Biol. Chem. 289:14056-14065
Project member :A03Kawasaki, T.
Author’s name :Kosami KI, Ohki I, Hayashi K, Tabata R, Usugi S, Kawasaki T, Fujiwara T, Nakagawa A, Shimamoto K, Kojimai C
Published year :2014
Title :Purification, crystallization and preliminary X-ray crystallographic analysis of a rice Rac/Rop GTPase, OsRac1.
Journal/Book :Acta Cryistallographica Section F. 70: 113-115
Project member :A03Tominaga-Wada, R. / Wada,T.
Author’s name :Tominaga-Wada, R., Wada,T.
Published year :2014
Title :Regulation of root hair cell differentiation by R3 MYB transcription factor in tomato and Arabidopsis.
Journal/Book :Frontiers in Plant Science 5: 91, 1-5
Project member :A02Fukushima, K.
Author’s name :Kuroda, K., Fujiwara, T., Hashida, K., Imai, T., Kushi, M., Saito, K., Fukushima, K.
Published year :2014
Title :The accumulation pattern of ferruginol in the heartwood-forming Cryptomeria japonica xylem as determined by time-of-flight secondary ion mass spectrometry and quantity analysis
Journal/Book :Annals of Botany 113:1029–1036
Project member :A02Fukushima, K.
Author’s name :Masumi, T., Matsushita, Y., Aoki, D., Takama, R., Saito, K., Kuroda, K., Fukushima, K.
Published year :2014
Title :Adsorption behavior of poly(dimethyl-diallylammonium chloride) on pulp fiber studied by cryo time-of-flight secondary ion mass spectrometry and cryo-scanning electron microscopy
Journal/Book :Appl. Surf. Sci. 289: 155–159
Project member :A01A02Matsunaga, S. / Higaki, T., Hasezawa, S.
Author’s name :Hasegawa, J., Higaki, T., Hamamura, Y., Kurihara, D., Kutsuna, N., Higashiyama, T., Hasezawa S., Matsunaga, S.
Published year :2014
Title :Increase in invaginated vacuolar membrane structure caused by plant cell expansion by genotoxic stress induced by DNA double-strand breaks.
Journal/Book :Cytologia, 79: 467–474
Project member :A01Ishizaki, K.
Author’s name :Althoff, F., Kopischke, S., Zobell, O., Ide, K., Ishizaki, K., Kohchi, T., *Zachgo, S.
Published year :2014
Title :Comparison of the MpEF1a and CaMV35 promoters for application in Marchantia polymorpha overexpression studies.
Journal/Book :Transgenic Res. 23: 235-244
Project member :A01A02Fujiwara, T. / Miwa,K.
Author’s name :Takada, S., Miwa, K., Omori, H., Fujiwara, T., Naito, S. Takano, J.
Published year :2014
Title :Improved tolerance to boron deficiency by enhanced expression of the boron transporter BOR2.
Journal/Book :Soil Sci. Plant Nutr. 60: 341-348
Project member :A01Fujiwara, T.
Author’s name :Leaungthitikanchana, S., Tanaka, M., Lordkaew, S., Jamjod, S., Rerkasem, B., Fujiwara, T.
Published year :2014
Title :Comparison of BOR1-like gene expression in two genotypes with different boron efficiencies in commercial crop plants in Thailand
Journal/Book :Soil Sci. Plant Nutr. 60:333-340
Project member :A01A02Fujiwara, T. / Miwa,K.
Author’s name :Miwa, K., Aibara, I., Fujiwara, T.
Published year :2014
Title :Arabidopsis thaliana BOR4 is upregulated under high boron conditions and confers tolerance to high boron.
Journal/Book :Soil Sci. Plant Nutr. 60:349-355
Project member :A03Yamaguchi,S.
Author’s name :Hu, Z., Yamauchi, T., Yang, J., Jikumaru, Y., Tsuchida-Mayama, T., Ichikawa, H., Takamure, I., Nagamura, Y., Tsutsumi, N., Yamaguchi, S., Kyozuka, J., *Nakazono, M.
Published year :2014
Title :Strigolactone and cytokinin act antagonistically in regulating rice mesocotyl elongation in darkness.
Journal/Book :Plant Cell Physiol. 55: 30-41
Project member :A03Sawa, S.
Author’s name :Nishiyama, H., Nakagami, S., Todaka, A., Arita, T., Ishida, T., Sawa, S
Published year :2014
Title :Light-dependent green gall formation induced by Meloidogyne incognita
Journal/Book :Nematology 889 – 893 doi:10.1163/15685411-00002814
Project member :A03Sawa, S.
Author’s name :Tabata, R., Sawa, S.
Published year :2014
Title :Maturation processes and structures of small secreted peptides in plants
Journal/Book :Front Plant Sci. 5: 311 doi: 10.3389/fpls.2014.00311
Project member :A02Igarashi, K.
Author’s name :Tsukagoshi, H., Nakamura, A., Ishida, T., Touhara, K. K., Otagiri, M. Moriya, S., Samejima, M., Igarashi, K., Fushinobu, S., Kitamoto, K., Arioka M.
Published year :2014
Title :Structural and biochemical analyses of glycoside hydrolase family 26 β-mannanase from a symbiotic protist of the termite Reticulitermes speratus
Journal/Book :J. Biol. Chem. 289:10843-10852
Project member :A02Igarashi, K.
Author’s name :Hori, C., Gaskell, J., Igarashi, K., Samejima, M., Hibbett, D., Henrissat, B., *Cullen, D.
Published year :2014
Title :Temporal Alterations in the Secretome of the Selective Ligninolytic Fungus Ceriporiopsis subvermispora during Growth on Aspen Wood Reveal This Organism's Strategy for Degrading Lignocellulose
Journal/Book :Appl. Environ. Microbiol. vol. 80 2062-2070
Project member :A02Kotake, T.,Tsumuraya, Y.
Author’s name :Shimoda, R., Okabe, K., Kotake, T., Matsuoka, K., Koyama, T., Tryfona, T., Liang H.-C., Dupree, P., Tsumuraya, Y.
Published year :2014
Title :Enzymatic fragmentation of carbohydrate moieties of radish arabinogalactan-protein and elucidation of the structures.
Journal/Book :Biosci. Biotechnol. Biochem. 78:818-831
Project member :A03Bartlem D.G.
Author’s name :Amin A.N.N., Hayashi S., Bartlem D.G.
Published year :2014
Title :A robust in vitro assay system for quantitative analysis of parasitic root-knot nematode infestation using Lotus japonicus.
Journal/Book :J. Biosci. Bioeng. in press. J BIOSCI BIOENG
Project member :A03Bartlem D.G.
Author’s name :Bartlem D.G., Jones M.G.K., Hammes U.Z.
Published year :2014
Title :Vascularisation and nutrient delivery at root-knot nematode feeding sites in host roots.
Journal/Book :J. Exp. Bot. 65: 1789-1798
Project member :A01A02Demura, T. / Ohtani, M.
Author’s name :Numata, K., Yoshizumi, T., Ohtani, M., Demura, T., Kodama, Y.
Published year :2014
Title :Local gene silencing in plants via synthetic dsRNA and carrier peptide
Journal/Book :Plant Biotechnol. J. 12:1027–1034 doi: 10.1111/pbi.12208
Project member :A01Uemura, T.
Author’s name :Ito, Y., Uemura, T., Nakano A.
Published year :2014
Title :Formation and maintenance of the plant Golgi apparatus
Journal/Book :Intl. Rev. Cell Mol. Biol. 310:221-287.
Project member :A01Uemura, T.
Author’s name :Katsiarimpa, A., Muñoz, A., Kalinowska, K., Uemura, T., Rojo, E. and *Isono, E.
Published year :2014
Title :The ESCRT-III interacting deubiquitinating enzyme AMSH3 is essential for degradation of ubiquitinated membrane proteins in Arabidopsis thaliana
Journal/Book :Plant Cell Physiol. 55:727-736
Project member :A01Ueda, T.
Author’s name :Ito, E., Ueda, T.
Published year :2014
Title :Analysis of Rab GTPase-effector interaction in endosomal trafficking by bimolecular flurescence complementation
Journal/Book :Methods in Molecular Biology, Vol.1209 pp 97-105
Project member :A01Ueda, T. / Uemura, T.
Author’s name :Hashiguchi, Y., Yano, D., Nagafusa, K., Kato, T., Saito, C., Uemura, T., Ueda, T., Nakano, A., Tasaka, M., Morita, MT
Published year :2014
Title :A unique HEAT repeat-containing protein SHOOT GRAVITROPISM 6 is involved in vacuolar membrane dynamics in gravity sensing cells of Arabidopsis inflorescence stem
Journal/Book :Plant Cell Physiol.55, 811-822
Project member :A01Ueda, T. / Uemura, T.
Author’s name :Fujiwara, M., Uemura, T., Ebine, K., Nishimori, Y., Ueda, T., Nakano, A., Sato, MH., Fukao, Y.
Published year :2014
Title :Interactomics of Qa-SNARE in Arabidopsis thaliana
Journal/Book :Plant Cell Physiol. 55: 781-78
Project member :A01Ueda, T. / Uemura, T.
Author’s name :Kawai-Toyooka, H., Mori, T., Hamaji, T., Suzuki, M., Olson, BJSC., Uemura, T., Ueda, T., Nakano, A., Toyoda, A., Fujiyama, A., Nozaki, H.
Published year :2014
Title :Sex-specific Post-translational Regulation of the Gamete Fusogen GCS1 in the Isogamous Volvocine Alga Gonium pectoral
Journal/Book :Eukaryotic Cell 13:648-656
Project member :A01Ueda, T.
Author’s name :Hoepflinger, M., Hametner, C., Ueda, T., Foissner I.
Published year :2014
Title :Vesicular trafficking in characean green algae and the possible involvement of a VAMP72-family protein
Journal/Book :Plant Signaling & Behavior, e28466
Project member :A01Kurata, T.
Author’s name :Sakakibara, K., Reisewitz, P., Aoyama, T., Friedrich, T., Ando, S., Sato, Y., Tamada, Y., Nishiyama, T., Hiwatashi, Y., Kurata, T., Ishikawa, M., Deguchi, H., Rensing, S.A., Werr, W., Murata, T., *Hasebe, M., Laux, T.
Published year :2014
Title :WOX13-like genes are required for reprogramming of leaf and protoplast cells into stem cells in the moss Physcomitrella patens
Journal/Book :Development 141: 1660-1670
Project member :A01Demura,T / Yoneda,A.
Author’s name :Ueda, K., Okawara, R., Yamasaki, S., Sanada, Y., Kinoshita, E., Yoneda, A., Demura, T., Kato K.
Published year :2014
Title :Efficient transgene expression by alleviation of translational repression in plant cells
Journal/Book :J. Biosci. Bioeng.
Project member :A01Demura, T.
Author’s name :Demura, T.
Published year :2014
Title :Tracheary element differentiation
Journal/Book :Plant Biotechnol. Rep. 8:17-21
Project member :A01Naramoto, S.
Author’s name :Naramoto, S., Nodzyński, T., Dainobu, Y., Takatsuka, H., Okada, T., Friml, J., Fukuda, H.
Published year :2014
Title :VAN4 encodes a putative TRS120 that is required for normal cell growth and vein development in Arabidopsis
Journal/Book :Plant Cell Physiol. 55: 750-763
Project member :A02Kuchitsu, K.
Author’s name :Kurusu T, Koyano T, Hanamata S, Kubo T, Noguchi Y, Yagi C, Nagata N, Yamamoto T, Ohnishi T, Okazaki Y, Kitahata N, Ando D, Ishikawa M, Wada S, Miyao A, Hirochika H, Shimada S, Makino A, Saito K, Ishida H, Kinoshita T, Kurata N, Kuchitsu K
Published year :2014
Title :OsATG7 is required for autophagy-dependent lipid metabolism in rice post-meiotic anther development.
Journal/Book :Autophagy10 : 878-888
Project member :A02Obayashi, T.
Author’s name :Hagiwara K, Obayashi T, Sakayori N, Yamanishi E, Hayashi R, Osumi N, Nakazawa T, Nishida K.
Published year :2014
Title :Molecular and cellular features of murine craniofacial and trunk neural crest cells as stem cell-like cells.
Journal/Book :PLoS One 20: e84072
Project member :A02Obayashi, T.
Author’s name :Obayashi T, Yano K.
Published year :2014
Title :Plant and Cell Physiology 2014 Online Database Issue.
Journal/Book :Plant Cell Physiol. 55: 1-2
Project member :A01Ueda, T. / Uemura, T.
Author’s name :Ebine, K., Inoue, T., Ito, J., Ito, E., Uemura T., Goh, T., Abe, A., Sato, K., Nakano, A., and Ueda, T.
Published year :2014
Title :Plant vacuolar trafficking occurs through distinctly regulated pathways.
Journal/Book :Curr. Biol., in press
Project member :A02Igarashi, K / Uchihashi, T
Author’s name :Igarashi, K., Uchihashi, T., Uchiyama, T., Sugimoto, H., Wada, M., Suzuki, K., Sakuda, S., Ando, T., Watanabe, T., Samejima, M.
Published year :2014
Title :Two-way traffic of glycoside hydrolase family 18 processive chitinases on crystalline chitin
Journal/Book :Nat. Commun. in press 10.1038/ncomms4975
Project member :A03Suzaki, T.
Author’s name :Suzaki, T., Ito, M., Yoro, E., Sato, S., Hirakawa, H., Takeda, N. and Kawaguchi, M.
Published year :2014
Title :Endoreduplication-mediated initiation of symbiotic organ development in Lotus Japonicus
Journal/Book :Development, in press
Project member :A02Higaki, T., Hasezawa, S.
Author’s name :Higaki, T., Higaki S., Hirota, M, Hasezawa, S.
Published year :2014
Title :Radiocesium distribution in bamboo shoots after the Fukushima nuclear accident.
Journal/Book :PLoS ONE 9(5): e97659.
Project member :A01 Ishizaki, K.
Author’s name :Kubota, A., Kita, S., Ishizaki, K., Nishihama, R., Yamato K.T., Kohchi, T.
Published year :2014
Title :Co-option of a photoperiodic growth phase transition system during land plant evolution.
Journal/Book :Nature Communications 5: 3668.
Project member :A03Shibuya,N. / Kawasaki,T.
Author’s name :Shinya,T.,Yamaguchi, K., Desaki,Y. , Yamada,K., Narisawa, T., Kobayashi, Y. , Maeda, K. , Suzuki, M. , Tanimoto, T., Takeda, J. , Nakashima, M., Funama, R., Narusaka, M., Narusaka,Y. , Kaku, H., Kawasaki,T., Shibuya, N.
Published year :2014
Title :Selective regulation of chitin-induced defense response by the Arabidopsis receptor-like cytoplasmic kinase PBL27.
Journal/Book :Plant J., in press. DOI: 10.1111/tpj.12535
Project member :A01Matsunaga, S.
Author’s name :Sano, Y., Watanabe, W., Matsunaga, S.
Published year :2014
Title :Chromophore-assisted laser inactivation – towards a spatiotemporal–functional analysis of proteins, and the ablation of chromatin, organelle and cell function.
Journal/Book :J. Cell Sci. 127, 1621-1629. doi: 10.1242/​jcs.144527
Project member :A03Suzaki, T.
Author’s name :Yoro, E., Suzaki, T., Toyokura, K., Miyazawa, H., Fukaki, H., Kawaguchi, M.
Published year :2014
Title :A positive regulator of nodule organogenesis, NODULE INCEPTION, acts as a negative regulator of rhizobial infection in Lotus japonicus
Journal/Book :Plant Physiol, in press
Project member :A03 Aida, M.
Author’s name :Kamiuchi, Y., Yamamoto, K., Furutani, M., Tasaka, M., Aida, M.
Published year :2014
Title :The CUC1 and CUC2 Genes Promote Carpel Margin Meristem Formation during Arabidopsis Gynoecium Development.
Journal/Book :Front. Plant Sci. 5:165. doi: 10.3389/fpls.2014.00165
Project member :A01A02Demura,T. / Kurata,T. / Yamaguchi,M. / Yoneda,A. / Ohtani,M
Author’s name :Xu,Bo, Ohtani,M., Yamaguchi,M., Toyooka,K., Wakazaki,M., Sato., M., Kubo,M., Nakano,Y.,Sano,R., Hiwatashi, Y., Murata,T., Kurata,T., Yoneda,A., Kato., K., Hasebe,M., Demura,T.,
Published year :2014
Title :Contribution of NAC Transcription Factors to Plant Adaptation to Land
Journal/Book :Science 343:1505-1508
Project member :A02Igarashi, K / Uchihashi, T
Author’s name :Nakamura, A, Watanabe, H, Ishida, T, Uchihashi T, Wada, M, Ando, T, Igarashi, K, Samejima, M
Published year :2014
Title :Trade-off between processivity and hydrolytic velocity of cellobiohydrolases at the surface of crystalline cellulose
Journal/Book :J. Am. Chem. Soc., DOI: 10.1021/ja4119994
Project member :A02Satoh,S. / Iwai,H
Author’s name :Takizawa, A., Hyodo, H., Wada, K., Ishii, T., Satoh, S. and Iwai, H.
Published year :2014
Title :Regulatory Specialization of Xyloglucan (XG) and Glucuronoarabinoxylan (GAX) in Pericarp Cell Walls during Fruit Ripening in Tomato (Solanum lycopersicum)
Journal/Book : PLoS One 9(2): e89871.
Project member :A02A03Satoh,S. / Sawa,S. / Yamaguchi,S.
Author’s name :Bidadi, H., Matsuoka, K., Sage-Ono, K., Fukushima, J., Pitaksaringkarn, W., Asahina, M., Yamaguchi, S., Sawa, S., Fukuda, H., Matsubayashi, Y., Ono, M., Satoh, S.
Published year :2014
Title :CLE6 expression recovers gibberellin deficiency to promote shoot growth in Arabidopsis
Journal/Book :Plant J. 78: 241–252
Project member :A03Sawa,S.
Author’s name :Araya,T., Miyamoto,M., Wibowo,J., Suzuki,A., Kojima,S., Tsuchiya,Y.N., Sawa,S., Fukuda,H., Wirénc,N., Takahashi,H.
Published year :2014
Title :CLE-CLAVATA1 peptide-receptor signaling module regulates the expansion of plant root systems in a nitrogen-dependent manner
Journal/Book :PNAS doi: 10.1073/pnas.1319953111
Project member :A02Obayashi T.
Author’s name :Obayashi T., Okamura Y., Ito S., Tadaka S., Aoki Y., Shirota M., Kinoshita K.
Published year :2014
Title :ATTED-II in 2014: Evaluation of Gene Coexpression in Agriculturally Important Plants.
Journal/Book :Plant Cell Physiol. 55:e6. doi: 10.1093/pcp/pct178.
Project member :A03Yamaguchi,S. / Seto,Y.
Author’s name :Seto,Y., Sado, A., Asami, K., Hanada,A., Umehara,M., Akiyama,K., Yamaguchi,S.
Published year :2014
Title :Carlactone is an endogenous biosynthetic precursor for strigolactones
Journal/Book :PNAS 111:1640-1645 doi: 10.1073/pnas.1314805111
Project member :A03Shibuya,N.
Author’s name :Hayafune, M., Berisio, R., Marchetti, R., Silipo, A., Kayama, M., Desaki, Y., Arima, S., Squeglia, F., Ruggiero, A., Tokuyasu, K., Molinaro, A., Kaku, H., Shibuya, N.
Published year :2014
Title :Chitin-induced activation of immune signaling by the rice receptor CEBiP relies on a unique sandwich-type dimerization.
Journal/Book :Proc. Natl. Acad. Sci. USA, 111: E404–E413 doi/10.1073/pnas.1312099111

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