研究業績一覧

Sato Y, Yasuhara K, Kikuchi J, Sato TN. (2013) Synthetic cell division system: Controlling equal vs unequal divisions by design. Sci Rep.  3 : 3475
( 2013/12/11 )

Hashimoto T. (2013) A ring for all: γ-tubulin-containing nucleation complexes in acentrosomal plant microtubule arrays. Curr Opin Plant Biol. 16 (6) : 698-703
( 2013/12/01 )

Jenie RI, Nishimura M, Fujino M, Nakaya M, Mizuno N, Tago K, Kurose H, Itoh H. (2013) Increased ubiquitination and the crosstalk of G protein signaling in cardiac myocytes: involvement of Ric-8B in Gs suppression by Gq signal. Genes Cells. 18 (12) : 1095-1106
( 2013/12/01 )

Hamada T, Nagasaki-Takeuchi N, Kato T, Fujiwara M, Sonobe S, Fukao Y, Hashimoto T. (2013) Purification and characterization of novel microtubule-associated proteins from Arabidopsis cell suspension cultures. Plant Physiol. 163 (4) : 1804-1816
( 2013/12/01 )

Dang TT, Shimatani Z, Kawano Y, Terada R, Shimamoto K. (2013) Gene Editing a Constitutively Active OsRac1 by Homologous Recombination-Based Gene Targeting Induces Immune Responses in Rice. Plant Cell Physiol. 54 (12) : 2058-2070
( 2013/12/01 )

Sekine D, Ohnishi T, Furuumi H, Ono A, Yamada T, Kurata N, Kinoshita T. (2013) Dissection of two major components of the post-zygotic hybridization barrier in rice endosperm. Plant J. 76 (5) : 792-799
( 2013/12/01 )

Takase Y, Tadokoro R, Takahashi Y. (2013) Low cost labeling with highlighter ink efficiently visualizes developing blood vessels in avian and mouse embryos. Dev Growth Differ. 2013 Dec 1. doi: 10.1111/dgd.12106.
( 2013/12/01 )

Kim SY, Hakoshima T, Kitano K. (2013) Structure of the RecQ C-terminal Domain of Human Bloom Syndrome Protein. Sci Rep. 3 : 3294
( 2013/11/21 )

Murakoshi M, Saiki K, Urayama K, Sato TN. (2013) An anthelmintic drug, pyrvinium pamoate, thwarts fibrosis and ameliorates myocardial contractile dysfunction in a mouse model of myocardial infarction. PLoS One. 8 (11) : e79374
( 2013/11/04 )

Tatehashi Y, Takagi H. (2013) Characterization of γ-glutamyl kinase mutants from Saccharomyces cerevisiae. J Biosci Bioeng. 116 (5) : 576-579
( 2013/11/01 )

Pham TM, Tan KW, Sakumura Y, Okumura K, Maki H, Akiyama MT. (2013) A single-molecule approach to DNA replication in Escherichia coli cells demonstrated that DNA polymerase III is a major determinant of fork speed. Mol Microbiol. 90 (3) : 584-596
( 2013/11/01 )

Toyota M, Ikeda N, Sawai-Toyota S, Kato T, Gilroy S, Tasaka M, Morita MT. (2013) Amyloplast displacement is necessary for gravisensing in Arabidopsis shoots as revealed by a centrifuge microscope. Plant J. 76 (4) : 648-660
( 2013/11/01 )

Zargar S, Kurata R, Inaba S, Fukao Y. (2013) Unraveling the iron deficiency responsive proteome in Arabidopsis shoot by iTRAQ-OFFGEL approach. Plant Signal Behav. 9 (1) : e26892
( 2013/10/29 )

Fujita S, Pytela J, Hotta T, Kato T, Hamada T, Akamatsu R, Ishida Y, Kutsuna N, Hasezawa S, Nomura Y, Nakagami H, Hashimoto T. (2013) An Atypical Tubulin Kinase Mediates Stress-Induced Microtubule Depolymerization in Arabidopsis. Curr Biol. 23 (20) : 1969-1978
( 2013/10/21 )

Kadokura H, Saito M, Tsuru A, Hosoda A, Iwawaki T, Inaba K, Kohno K. (2013) Identification of the redox partners of ERdj5/JPDI, a PDI family member, from an animal tissue. Biochem Biophys Res Commun. 440 (2) : 245-250
( 2013/10/18 )

Muhchyi C, Juliandi B, Matsuda T, Nakashima K. (2013) Epigenetic regulation of neural stem cell fate during corticogenesis. Int J Dev Neurosci. 31 (6) : 424-433
( 2013/10/01 )

Takahashi N, Kajihara T, Okamura C, Kim Y, Katagiri Y, Okushima Y, Matsunaga S, Hwang I, Umeda M. (2013) Cytokinins Control Endocycle Onset by Promoting the Expression of an APC/C Activator in Arabidopsis Roots. Curr Biol. 23 (18) : 1812-1817
( 2013/09/12 )

Yoshida A, Kato JY, Nakamae I, Yoneda-Kato N. (2013) COP1 targets C/EBPα for degradation and induces acute myeloid leukemia via Trib1. Blood 122 (10) : 1750-1760
( 2013/09/05 )

Tahara N, Bessho Y, Matsui T. (2013) Celf1 is required for formation of endoderm-derived organs in zebrafish. Int J Mol Sci. 14 (9) : 18009-18023
( 2013/09/03 )

Nakamura M, Buzas DM, Kato A, Fujita M, Kurata N, Kinoshita T. (2013) The role of Arabidopsis thaliana NAR1, a cytosolic iron-sulfur cluster assembly component, in gametophytic gene expression and oxidative stress responses in vegetative tissue. New Phytol. 199 (4) : 925-935
( 2013/09/01 )

Yuniarti N, Juliandi B, Muhchyi C, Noguchi H, Sanosaka T, Nakashima K. (2013) Prenatal exposure to suberoylanilide hydroxamic acid perturbs corticogenesis. Neurosci Res. 77 (1-2) : 42-49
( 2013/09/01 )

Yoshiyama KO, Kobayashi J, Ogita N, Ueda M, Kimura S, Maki H, Umeda M. (2013) ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis. EMBO Rep. 14 (9) : 817-822
( 2013/09/01 )

Uchida N, Sakamoto T, Tasaka M, Kurata T. (2014) Identification of EMS-Induced Causal Mutations in Arabidopsis thaliana by Next-Generation Sequencing. Methods Mol Biol. 1062 : 259-270
( 2013/09/01 )

Morigasaki S, Shiozaki K. (2013) Phosphorelay-dependent and -independent regulation of MAPKKK by the Mcs4 response regulator in fission yeast. Commun Integr Biol. 6 (5) : e25020
( 2013/09/01 )

Nobusawa T, Okushima Y, Nagata N, Kojima M, Sakakibara H, Umeda M. (2013) Restriction of cell proliferation in internal tissues via the synthesis of very-long-chain fatty acids in the epidermis. Plant Signal Behav. 8 (8) : pii: e25232
( 2013/08/08 )

Kawano Y, Shimamoto K. (2013) Early signaling network in rice PRR-mediated and R-mediated immunity. Curr Opin Plant Biol. 16 (4) : 496-504
( 2013/08/05 )

Chumsakul O, Nakamura K, Kurata T, Sakamoto T, Hobman JL, Ogasawara N, Oshima T, Ishikawa S. (2013) High-Resolution Mapping of In vivo Genomic Transcription Factor Binding Sites Using In situ DNase I Footprinting and ChIP-seq. DNA Res. 20 (4) : 325-338
( 2013/08/01 )

Nakamura N, Iwano M, Havaux M, Yokota A, Munekage YN. (2013) Promotion of cyclic electron transport around photosystem I during the evolution of NADP-malic enzyme-type C4 photosynthesis in the genus Flaveria New Phytol. 199 (3) : 832-842
( 2013/08/01 )

Nasuno R, Hirano Y, Itoh T, Hakoshima T, Hibi T, Takagi H. (2013) Structural and functional analysis of the yeast N-acetyltransferase Mpr1 involved in oxidative stress tolerance via proline metabolism. Proc Natl Acad Sci U S A. 110 (29) : 11821-11826
( 2013/07/16 )

Ishiwata-Kimata Y, Yamamoto YH, Takizawa K, Kohno K, Kimata Y. (2013) F-actin and a type-II myosin are required for efficient clustering of the ER stress sensor Ire1 Cell Struct Funct. 38 (2) : 135-143
( 2013/07/06 )

Hirokawa Y, Kawano H, Tanaka-Masuda K, nakamura N, Nakagawa A, Ito M, Mori H, Oshima T, Ogasawara N (2013) Genetic manipulations restored the growth fitness of reduced-genome　Escherichia coli. J Biosci Bioeng. 116 (1) : 52-58
( 2013/07/01 )

Supanji, Shimomachi M, Hasan MZ, Kawaichi M, Oka C. (2013) HtrA1 is induced by oxidative stress and enhances cell senescence through p38 MAPK pathway Exp Eye Res. 112 : 79-92
( 2013/07/01 )

Nakano T, Ohki I, Yokota A, Ashida H. (2013) MtnBD Is a Multifunctional Fusion Enzyme in the Methionine Salvage Pathway of Tetrahymena thermophila. PLoS One. 8 (7) : e67385
( 2013/07/01 )

Itoh H, Nishimura A, Nagai Y. (2013) [New research initiatives in the regulatory mechanisms of heterotrimeric G protein signaling]. Seikagaku. 85 (7) : 531-542
( 2013/07/01 )

Ikeda A, Iizuka T, Maekubo N, Aono R, Kikuchi J, Akiyama M, Konishi T, Ogawa T, Ishida-Kitagawa N, Tatebe H, Shiozaki K. (2013) Cyclodextrin complexed [60]fullerene derivatives with high levels of photodynamic activity by long wavelength excitation. ACS Med Chem Lett 4 (8) : 752-756
( 2013/06/18 )

Omae M, Takada N, Yamamoto S, Nakajima H, Sato TN. (2013) Identification of Inter-Organ Vascular Network: Vessels Bridging between Organs. PLoS One. 8 (6) : e65720
( 2013/06/14 )

Nguyen TS, Kohno K, Kimata Y. (2013) Zinc Depletion Activates the Endoplasmic Reticulum-Stress Sensor Ire1 via Pleiotropic Mechanisms. Biosci Biotechnol Biochem. 77 (6) : 1337-1339
( 2013/06/07 )

Sasaki T, Takagi H. (2013) Phosphorylation of a conserved Thr357 in yeast Nedd4-like ubiquitin ligase Rsp5 is involved in downregulation of the general amino acid permease Gap1. Genes Cells. 18 (6) : 459-475
( 2013/06/01 )

Ueda, T., Takahashi, T., Uyar, E., Ishikawa, S., Ogasawara, N., Oshima, T. (2013) Functions of the Hha and YdgT proteins in transcriptional silencing by the nucleoid proteins, H-NS and StpA, in Escherichia coli DNA Res. 20 (3) : 263-271
( 2013/06/01 )

Shoji T, Mishima M, Hashimoto T. (2013) Divergent DNA-binding specificities of a group of ERF transcription factors involved in plant defense. Plant Physiol. 162 (2) : 977-990
( 2013/06/01 )

Sasano Y, Haitani Y, Hashida K, Oshiro S, Shima J, Takagi H. (2013) Improvement of fermentation ability under baking-associated stress conditions by altering the POG1 gene expression in baker's yeast. Int J Food Microbiol. 165 (3) : 241-245
( 2013/05/28 )

Nakano T, Saito Y, Yokota A, Ashida H. (2013) Plausible Novel Ribose Metabolism Catalyzed by Enzymes of the Methionine Salvage Pathway in Bacillus subtilis. Biosci Biotechnol Biochem. 77 (5) : 1104-1107
( 2013/05/23 )

Hoshiyasu S., Kohzuma K., Yoshida K., Fujiwara M., Fukao Y., Yokota A. and Akashi K. (2013) Potential involvement of N-terminal acetylation in the quantitative regulation of the ε subunit of chloroplast ATP synthase under drought stress. Biosci Biotechnol Biochem. 77 (5) : 998-1007
( 2013/05/23 )

Fukao Y, Yoshida M, Kurata R, Kobayashi M, Nakanishi M, Fujiwara M, Nakajima K, Ferjani A. (2013) Peptide Separation Methodologies for In-depth Proteomics in Arabidopsis. Plant Cell Physiol. 54 (5) : 808-815
( 2013/05/01 )

Tsuji H, Taoka KI, Shimamoto K. (2013) Florigen in rice: complex gene network for florigen transcription, florigen activation complex, and multiple functions. Curr Opin Plant Biol. 16 (2) : 228-235
( 2013/05/01 )

Nakayashiki T, Saito N, Takeuchi R, Kadokura H, Nakahigashi K, Mori H. (2013) tRNA thiolation pathway modulates intracellular redox state in Escherichia coli. J Bacteriol. 195 (9) : 2039-2049
( 2013/05/01 )

Taoka KI, Ohki I, Tsuji H, Kojima C, Shimamoto K (2013) Structure and function of florigen and the receptor complex. Trends Plant Sci. 18 (5) : 287-294
( 2013/05/01 )

Atsuta Y,Tadokoro R, Saito D, Takahashi Y. (2013) Transgenesis of the Wolffian duct visualizes dynamic behavior of cells undergoing tubulogenesis in vivo. Dev Growth Differ. 55 (4) : 579-590
( 2013/05/01 )

Komeda C, Ikeda A, Kikuchi JI, Ishida-Kitagawa N, Tatebe H, Shiozaki K, Akiyama M. (2013) A photo-triggerable drug carrier based on cleavage of PEG lipids by photosensitiser-generated reactive singlet oxygen. Org Biomol Chem. 11 (16) : 2567-2570
( 2013/04/28 )

Urayama S, Semi K, Sanosaka T, Hori Y, Namihira M, Kohyama J, Takizawa T, Nakashima K. (2013) Chromatin accessibility at a STAT3 target site is altered prior to astrocyte differentiation. Cell Struct Funct. 38 (1) : 55-66
( 2013/04/18 )

Akamatsu A, Wong HL, Fujiwara M, Okuda J, Nishide K, Uno K, Imai K, Umemura K, Kawasaki T, Kawano Y, Shimamoto K. (2013) An OsCEBiP/OsCERK1-OsRacGEF1-OsRac1 Module Is an Essential Early Component of Chitin-Induced Rice Immunity. Cell Host Microbe. 13 (4) : 465-476
( 2013/04/17 )

Nobusawa T, Okushima Y, Nagata N, Kojima M, Sakakibara H, Umeda M. (2013) Synthesis of very-long-chain fatty acids in the epidermis controls plant organ growth by restricting cell proliferation. PLoS Biol. 11 (4) : e1001531
( 2013/04/09 )

Morigasaki S, Ikner A, Tatebe H, Shiozaki K. (2013) Response regulator-mediated MAPKKK heteromer promotes stress signaling to the Spc1 MAPK in fission yeast. Mol Biol Cell. 24 (7) : 1083-1092
( 2013/04/01 )

Ishiwata-Kimata Y, Promlek T, Kohno K, Kimata Y. (2013) BiP-bound and nonclustered mode of Ire1 evokes a weak but sustained unfolded protein response. Genes Cells. 18 (4) : 288-301
( 2013/04/01 )

Lei Y, Oshima T, Ogasawara N, Ishikawa S. (2013) Functional analysis of the protein Veg that stimulates biofilm formation in Bacillus subtilis. J Bacteriol. 195 (8) : 1697-1705
( 2013/04/01 )

Matsuura H, Takenami S, Kubo Y, Ueda K, Ueda A, Yamaguchi M, Hirata K, Demura T, Kanaya S, Kato K. (2013) A Computational and Experimental Approach Reveals that the 5'-proximal Region of the 5'-UTR Has a Cis-Regulatory Signature Responsible for Heat Stress-Regulated mRNA Translation in Arabidopsis. Plant Cell Physiol. 54 (4) : 474-483
( 2013/04/01 )

Hashimoto T. (2013) Dissecting the cellular functions of plant microtubules using mutant tubulins. Cytoskeleton (Hoboken). 70 (4) : 191-200
( 2013/04/01 )

Toriyama M, Kozawa S, Sakumura Y. and Inagaki, N. (2013) Conversion of a signal into forces for axon outgrowth through Pak1-mediated shootin1 phosphorylation. Curr Biol. 23 (6) : 529-534
( 2013/03/18 )

Fukao Y, Yoshida M, Kurata R, Kobayashi M, Nakanishi M, Fujiwara M, Nakajima K, Ferjani A. (2013) Peptide Separation Methodologies for In-depth Proteomics in Arabidopsis. Plant Cell Physiol. 54(5):808-15
( 2013/03/15 )

Nitta M, Imamura M, Inoue Y, Kunitomo Y, Lin ZY, Ogawa T, Yogo K, Ishida-Kitagawa N, Fukunaga N, Okano H, Sato E, Takeya T, Miyoshi J. (2013) Aberrant Gene Expression and Sexually Incompatible Genomic Imprinting in Oocytes Derived from XY Mouse Embryonic Stem Cells In Vitro. PLoS One. 8 (3) : e58555
( 2013/03/05 )

Uchida N, Shimada M, Tasaka M. (2013) ERECTA-family receptor kinases regulate stem-cell homeostasis via buffering its cytokinin responsiveness in the shoot apical meristem. Plant Cell Physiol. 54 (3) : 343-351
( 2013/03/01 )

Tsuji H, Nakamura H, Taoka KI, Shimamoto K. (2013) Functional Diversification of FD Transcription Factors in Rice, Components of Florigen Activation Complexes. Plant Cell Physiol. 54 (3) : 385-397
( 2013/03/01 )

Manabe, K., Kageyama, Y., Morimoto, T., Shimizu, E., Takahashi, H., Kanaya, S., Ara, K., Ozaki, K., Ogasawara, N. (2013) Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions. Microb Cell Fact. 12 (1) : 18
( 2013/02/18 )

Lai KS, Kaothien-Nakayama P, Iwano M, Takayama S. (2013) A TILLING resource for functional genomics in Arabidopsis thaliana accession C24. Genes Genet Syst. 87 (5) : 291-297
( 2013/02/13 )

Nakano T, Saito Y, Yokota A, Ashida H. (2013) His267 is involved in carbamylation and catalysis of RuBisCO-like protein from Bacillus subtilis. Biochem Biophys Res Commun. 431 (2) : 176-180
( 2013/02/08 )

Tsuru A, Fujimoto N, Takahashi S, Saito M, Nakamura D, Iwano M, Iwawaki T, Kadokura H, Ron D, Kohno K. (2013) Negative feedback by IRE1β optimizes mucin production in goblet cells. Proc Natl Acad Sci U S A. 110(8):2864-9
( 2013/02/05 )

Waki T, Miyashima S, Nakanishi M, Ikeda Y, Hashimoto T, Nakajima K. (2013) A GAL4-based targeted activation tagging system in Arabidopsis thaliana. Plant J. 73 (3) : 357-367
( 2013/02/01 )

Kagiyama M, Hirano Y, Mori T, Kim SY, Kyozuka J, Seto Y, Yamaguchi S, Hakoshima T. (2013) Structures of D14 and D14L in the strigolactone and karrikin signaling pathways. Genes Cells. 18 (2) : 147-160
( 2013/02/01 )

Yoshida A, Yoneda-Kato N, Kato JY. (2013) CSN5 specifically interacts with CDK2 and controls senescence in a cytoplasmic cyclin E-mediated manner. Sci Rep. 3 : 1054
( 2013/01/11 )

Kobayashi S, Yoneda-Kato N, Itahara N, Yoshida A, Kato JY. (2013) The COP1 E3-ligase interacts with FIP200, a key regulator of mammalian autophagy. BMC Biochem. 14: 1
( 2013/01/06 )

Nishimura A, Kawahara N, Takagi H. (2013) The flavoprotein Tah18-dependent NO synthesis confers high-temperature stress tolerance on yeast cells. Biochem Biophys Res Commun. 430 (1) : 137-143
( 2013/01/04 )

Nakayashiki T, Mori H. (2013) Genome-wide screening with hydroxyurea reveals a link between non-essential ribosomal proteins and ROS production. J Bacteriol. 195(6), 1226-35
( 2013/01/04 )

Miyashima S, Honda M, Hashimoto K, Tatematsu K, Hashimoto T, Sato-Nara K, Okada K, Nakajima K. (2013) A Comprehensive Expression Analysis of the Arabidopsis MICRORNA165/6 Gene Family during Embryogenesis Reveals a Conserved Role in Meristem Specification and a Non-cell-autonomous Function. Plant Cell Physiol. 54(3), 375-84
( 2013/01/03 )

Bach TM, Hara R, Kino K, Ohtsu I, Yoshida N, Takagi H. (2013) Microbial production of N-acetyl cis-4-hydroxy-L: -proline by coexpression of the Rhizobium L: -proline cis-4-hydroxylase and the yeast N-acetyltransferase Mpr1. Appl Microbiol Biotechnol. 97 (1) : 247-257
( 2013/01/01 )

Hashiguchi Y, Tasaka M, Morita MT. (2013) Mechanism of higher plant gravity sensing. Am J Bot. 100 (1) : 91-100
( 2013/01/01 )

Hattori Y, Furuita K, Ohki I, Ikegami T, Fukada H, Shirakawa M, Fujiwara T, Kojima C. (2013) Utilization of lysine 13C-methylation NMR for protein–protein interaction studies J. Biomol. NMR 55 (1) : 19-31
( 2013/01/01 )