研究業績一覧
2009年12月
Bahtiar, A., Matsumoto, T., Nakamura, T., Akiyama, M., Yogo, K., Ishida-Kitagawa, N., Ogawa, T. and Takeya, T. (2009) Identification of a novel L-serine analog that suppresses osteoclastogenesis in vitro and bone turnover in vivo. J Biol Chem 284, 34157-34166.
( 2009/12/01 )
Fukao, Y., Ferjani, A., Fujiwara, M., Nishimori, Y. and Ohtsu, I. (2009) Identification of zinc-responsive proteins in the roots of Arabidopsis thaliana using a highly improved method of two-dimensional electrophoresis. Plant Cell Physiol 50, 2234-2239.
( 2009/12/01 )
Furuita, K., Murata, S., Jee, J., Ichikawa, S., Matsuda, A. and Kojima, C. (2009) NMR studies of DNA recognition mechanism of HMGB1 protein. Nucleic Acids Symp Ser (Oxf) (53), 89-90.
( 2009/12/01 )
Higuchi, M., Kakimoto, T. and Mizuno, T. (2009) Cytokinin sensing systems using microorganisms. Methods Mol Biol 495, 101-109.
( 2009/12/01 )
Kurita, Y., Onoue, T., Ikeda, A. and Ogasawara, T. (2009) Biomechanical analysis of subjective pinching effort based on tendon-skeletal model. Conf Proc IEEE Eng Med Biol Soc 2009, 5231-5234.
( 2009/12/01 )
Obayashi, C., Tamei, T., Imai, A. and Shibata, T. (2009) Comparison of experts and non-experts in throwing darts based on optimization criteria. Conf Proc IEEE Eng Med Biol Soc 2009, 2647-2650.
( 2009/12/01 )
Tokuda, T., Takeuchi, Y., Noda, T., Sasagawa, K., Nishida, K., Kitaguchi, Y., Fujikado, T., Tano, Y. and Ohta, J. (2009) Light-controlled retinal stimulation on rabbit using CMOS-based flexible multi-chip stimulator. Conf Proc IEEE Eng Med Biol Soc 2009, 646-649.
( 2009/12/01 )
2009年11月
Peng L, Fukao Y, Fujiwara M, Takami T, Shikanai T.(2009) Efficient operation of NAD(P)H dehydrogenase requires supercomplex formation with photosystem I via minor LHCI in Arabidopsis. Plant Cell. 21 (11), 3623-3640.
( 2009/11/01 )
Ohata, E., Tadokoro, R., Sato, Y., Saito, D. and Takahashi, Y. (2009) Notch signal is sufficient to direct an endothelial conversion from non-endothelial somitic cells conveyed to the aortic region by CXCR4. Dev Biol 335, 33-42.
( 2009/11/01 )
Aoyama, T., Hata, S., Nakao, T., Tanigawa, Y., Oka, C. and Kawaichi, M. (2009) Cayman ataxia protein caytaxin is transported by kinesin along neurites through binding to kinesin light chains. J Cell Sci 122, 4177-4185.
( 2009/11/01 )
Kato, J. Y. and Yoneda-Kato, N. (2009) Mammalian COP9 signalosome. Genes Cells 14, 1209-1225.
( 2009/11/01 )
Ukibe, K., Hashida, K., Yoshida, N. and Takagi, H. (2009) Metabolic engineering of Saccharomyces cerevisiae for astaxanthin production and oxidative stress tolerance. Appl Environ Microbiol 75, 7205-7211.
( 2009/11/01 )
Asano, H., Aonuma, M., Sanosaka, T., Kohyama, J., Namihira, M. and Nakashima, K. (2009) Astrocyte differentiation of neural precursor cells is enhanced by retinoic acid through a change in epigenetic modification. Stem Cells 27, 2744-2752.
( 2009/11/01 )
Igawa, T., Hoshino, Y. and Yanagawa, Y. (2009) Isolation and characterization of the plant glsA promoter from Alstroemeria. Plant Biol (Stuttg) 11, 878-885.
( 2009/11/01 )
Nakashima, K., Kohyama, J., Namihira, M., Gage, F. H., Okano, H. and Sawamoto, K. (2009) [Epigenetic mechanisms regulating neural cell fate determination]. No To Hattatsu 41, 411-414.
( 2009/11/01 )
2009年10月
Hiraishi, H., Okada, M., Ohtsu, I. and Takagi, H. (2009) A functional analysis of the yeast ubiquitin ligase Rsp5: the involvement of the ubiquitin-conjugating enzyme Ubc4 and poly-ubiquitination in ethanol-induced down-regulation of targeted proteins. Biosci Biotechnol Biochem 73, 2268-2273.
( 2009/10/01 )
Komiya, R., Yokoi, S. and Shimamoto, K. (2009) A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice. Development 136, 3443-3450.
( 2009/10/01 )
Takagi, H. (2009) [Novel yeast acetyltransferase Mpr1 regulates reactive oxygen species mediated by proline metabolism]. Seikagaku 81, 891-895.
( 2009/10/01 )
2009年09月
Wong, H. L. and Shimamoto, K. (2009) Sending ROS on a bullet train. Sci Signal 2, pe60.
( 2009/09/01 )
Hiraishi, H., Shimada, T., Ohtsu, I., Sato, T. A. and Takagi, H. (2009) The yeast ubiquitin ligase Rsp5 downregulates the alpha subunit of nascent polypeptide-associated complex Egd2 under stress conditions. FEBS J 276, 5287-5297.
( 2009/09/01 )
Kaino, T. and Takagi, H. (2009) Proline as a stress protectant in the yeast Saccharomyces cerevisiae: effects of trehalose and PRO1 gene expression on stress tolerance. Biosci Biotechnol Biochem 73, 2131-2135.
( 2009/09/01 )
Ogawa, T., Nishimura, K., Aoki, T., Takase, H., Tomizawa, K., Ashida, H. and Yokota, A. (2009) A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis. Plant Physiol 151, 114-128.
( 2009/09/01 )
Tsujimura, K., Abematsu, M., Kohyama, J., Namihira, M. and Nakashima, K. (2009) Neuronal differentiation of neural precursor cells is promoted by the methyl-CpG-binding protein MeCP2. Exp Neurol 219, 104-111.
( 2009/09/01 )
2009年08月
Takatsuka, H., Ohno, R. and Umeda, M. (2009) The Arabidopsis cyclin-dependent kinase-activating kinase CDKF;1 is a major regulator of cell proliferation and cell expansion but is dispensable for CDKA activation. Plant J 59, 475-487.
( 2009/08/01 )
Morimoto, T., Ara, K., Ozaki, K. and Ogasawara, N. (2009) A new simple method to introduce marker-free deletions in the Bacillus subtilis genome. Genes Genet Syst 84, 315-318.
( 2009/08/01 )
Rukmana, A., Morimoto, T., Takahashi, H., Giyanto and Ogasawara, N. (2009) Assessment of transcriptional responses of Bacillus subtilis cells to the antibiotic enduracidin, which interferes with cell wall synthesis, using a high-density tiling chip. Genes Genet Syst 84, 253-267.
( 2009/08/01 )
2009年07月
Nakamura, M. and Hashimoto, T. (2009) A mutation in the Arabidopsis gamma-tubulin-containing complex causes helical growth and abnormal microtubule branching. J Cell Sci 122, 2208-2217.
( 2009/07/01 )
Fujiwara, M., Hamada, S., Hiratsuka, M., Fukao, Y., Kawasaki, T. and Shimamoto, K. (2009) Proteome analysis of detergent-resistant membranes (DRMs) associated with OsRac1-mediated innate immunity in rice. Plant Cell Physiol 50, 1191-1200.
( 2009/07/01 )
Ishikawa, R. and Kinoshita, T. (2009) Epigenetic programming: the challenge to species hybridization. Mol Plant 2, 589-599.
( 2009/07/01 )
Iwano, M., Entani, T., Shiba, H., Kakita, M., Nagai, T., Mizuno, H., Miyawaki, A., Shoji, T., Kubo, K., Isogai, A. and Takayama, S. (2009) Fine-tuning of the cytoplasmic Ca2+ concentration is essential for pollen tube growth. Plant Physiol 150, 1322-1334.
( 2009/07/01 )
Tachiki, K., Kodama, Y., Nakayama, H. and Shinmyo, A. (2009) Determination of the in vivo distribution of nuclear matrix attachment regions using a polymerase chain reaction-based assay in Arabidopsis thaliana. J Biosci Bioeng 108, 11-19.
( 2009/07/01 )
Takenouchi, T. and Ishii, S. (2009) A multiclass classification method based on decoding of binary classifiers. Neural Comput 21, 2049-2081.
( 2009/07/01 )
2009年06月
Suzuki, I., Takenouchi, T., Ohira, M., Oba, S. and Ishii, S. (2009) Robust model selection for classification of microarrays. Cancer Inform 7, 141-157.
( 2009/06/01 )
Nakata, A., Urano, D., Fujii-Kuriyama, Y., Mizuno, N., Tago, K. and Itoh, H. (2009) G-protein signalling negatively regulates the stability of aryl hydrocarbon receptor. EMBO Rep 10, 622-628.
( 2009/06/01 )
Iinoya, K., Kotani, T., Sasano, Y. and Takagi, H. (2009) Engineering of the yeast antioxidant enzyme Mpr1 for enhanced activity and stability. Biotechnol Bioeng 103, 341-352.
( 2009/06/01 )
2009年05月
Watanabe, T., Sato, Y., Saito, D., Tadokoro, R. and Takahashi, Y. (2009) EphrinB2 coordinates the formation of a morphological boundary and cell epithelialization during somite segmentation. Proc Natl Acad Sci U S A 106, 7467-7472.
( 2009/05/01 )
Saito, Y., Ashida, H., Sakiyama, T., de Marsac, N. T., Danchin, A., Sekowska, A. and Yokota, A. (2009) Structural and functional similarities between a ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO)-like protein from Bacillus subtilis and photosynthetic RuBisCO. J Biol Chem 284, 13256-13264.
( 2009/05/01 )
Adachi, S., Nobusawa, T. and Umeda, M. (2009) Quantitative and cell type-specific transcriptional regulation of A-type cyclin-dependent kinase in Arabidopsis thaliana. Dev Biol 329, 306-314.
( 2009/05/01 )
Murakami, H., Horihata, M., Andojo, S., Yoneda-Kato, N. and Kato, J. Y. (2009) Isolation and characterization of cytoplasmic cyclin D1 mutants. FEBS Lett 583, 1575-1580.
( 2009/05/01 )
Igawa, T., Fujiwara, M., Takahashi, H., Sawasaki, T., Endo, Y., Seki, M., Shinozaki, K., Fukao, Y. and Yanagawa, Y. (2009) Isolation and identification of ubiquitin-related proteins from Arabidopsis seedlings. J Exp Bot 60, 3067-3073.
( 2009/05/01 )
Hayashi, S., Shimoda, T., Nakajima, M., Tsukada, Y., Sakumura, Y., Dale, J. K., Maroto, M., Kohno, K., Matsui, T. and Bessho, Y. (2009) Sprouty4, an FGF inhibitor, displays cyclic gene expression under the control of the notch segmentation clock in the mouse PSM. PLoS One 4, e5603.
( 2009/05/01 )
Karim, M. R., Hirota, A., Kwiatkowska, D., Tasaka, M. and Aida, M. (2009) A role for Arabidopsis PUCHI in floral meristem identity and bract suppression. Plant Cell 21, 1360-1372.
( 2009/05/01 )
Yoda, H., Fujimura, K., Takahashi, H., Munemura, I., Uchimiya, H. and Sano, H. (2009) Polyamines as a common source of hydrogen peroxide in host- and nonhost hypersensitive response during pathogen infection. Plant Mol Biol 70, 103-112.
( 2009/05/01 )
Ogino, H. and Ochi, H. (2009) Resources and transgenesis techniques for functional genomics in Xenopus. Dev Growth Differ 51, 387-401.
( 2009/05/01 )
2009年04月
Nagano M, Ihara-Ohori Y, Imai H, Inada N, Fujimoto M, Tsutsumi N, Uchimiya H, Kawai-Yamada M.(2009) Functional association of cell death suppressor, Arabidopsis Bax inhibitor-1, with fatty acid 2-hydroxylation through cytochrome b₅. Plant J. 58 (1), 122-134.
( 2009/04/01 )
Fujiwara, Y., Yamashita, O., Kawawaki, D., Doya, K., Kawato, M., Toyama, K. and Sato, M. A. (2009) A hierarchical Bayesian method to resolve an inverse problem of MEG contaminated with eye movement artifacts. Neuroimage 45, 393-409.
( 2009/04/01 )
Kaneda, T., Taga, Y., Takai, R., Iwano, M., Matsui, H., Takayama, S., Isogai, A. and Che, F. S. (2009) The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death. EMBO J 28, 926-936.
( 2009/04/01 )
Iwata, Y., Yoneda, M., Yanagawa, Y. and Koizumi, N. (2009) Characteristics of the nuclear form of the Arabidopsis transcription factor AtbZIP60 during the endoplasmic reticulum stress response. Biosci Biotechnol Biochem 73, 865-869.
( 2009/04/01 )
Uyar, E., Kurokawa, K., Yoshimura, M., Ishikawa, S., Ogasawara, N. and Oshima, T. (2009) Differential binding profiles of StpA in wild-type and h-ns mutant cells: a comparative analysis of cooperative partners by chromatin immunoprecipitation-microarray analysis. J Bacteriol 191, 2388-2391.
( 2009/04/01 )
Yanagitani, K., Imagawa, Y., Iwawaki, T., Hosoda, A., Saito, M., Kimata, Y. and Kohno, K. (2009) Cotranslational targeting of XBP1 protein to the membrane promotes cytoplasmic splicing of its own mRNA. Mol Cell 34, 191-200.
( 2009/04/01 )
Ishikawa, R., Shinomura, T., Takano, M. and Shimamoto, K. (2009) Phytochrome dependent quantitative control of Hd3a transcription is the basis of the night break effect in rice flowering. Genes Genet Syst 84, 179-184.
( 2009/04/01 )
Kodama, Y., Tamura, T., Hirasawa, W., Nakamura, K. and Sano, H. (2009) A novel protein phosphorylation pathway involved in osmotic-stress response in tobacco plants. Biochimie 91, 533-539.
( 2009/04/01 )
Yukinawa, N., Oba, S., Kato, K. and Ishii, S. (2009) Optimal aggregation of binary classifiers for multiclass cancer diagnosis using gene expression profiles. IEEE/ACM Trans Comput Biol Bioinform 6, 333-343.
( 2009/04/01 )
2009年03月
Takahashi, Y., Teshima, K. M., Yokoi, S., Innan, H. and Shimamoto, K. (2009) Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice. Proc Natl Acad Sci U S A 106, 4555-4560.
( 2009/03/01 )
Kohzuma, K., Cruz, J. A., Akashi, K., Hoshiyasu, S., Munekage, Y. N., Yokota, A. and Kramer, D. M. (2009) The long-term responses of the photosynthetic proton circuit to drought. Plant Cell Environ 32, 209-219.
( 2009/03/01 )
Miyashima, S., Hashimoto, T. and Nakajima, K. (2009) ARGONAUTE1 acts in Arabidopsis root radial pattern formation independently of the SHR/SCR pathway. Plant Cell Physiol 50, 626-634.
( 2009/03/01 )
Purwestri, Y. A., Ogaki, Y., Tamaki, S., Tsuji, H. and Shimamoto, K. (2009) The 14-3-3 protein GF14c acts as a negative regulator of flowering in rice by interacting with the florigen Hd3a. Plant Cell Physiol 50, 429-438.
( 2009/03/01 )
Islam, M. S., Tatsumi, K., Okuda, H., Shiosaka, S. and Wanaka, A. (2009) Olig2-expressing progenitor cells preferentially differentiate into oligodendrocytes in cuprizone-induced demyelinated lesions. Neurochem Int 54, 192-198.
( 2009/03/01 )
2009年02月
Minami A, Fujiwara M, Furuto A, Fukao Y, Yamashita T, Kamo M, Kawamura Y, Uemura M.(2009) Alterations in detergent-resistant plasma membrane microdomains in Arabidopsis thaliana during cold acclimation.
Plant Cell Physiol. 50 (2), 341-359.
( 2009/02/01 )
Sanosaka, T., Namihira, M. and Nakashima, K. (2009) Epigenetic mechanisms in sequential differentiation of neural stem cells. Epigenetics 4, 89-92.
( 2009/02/01 )
Mizuno, N. and Itoh, H. (2009) Functions and regulatory mechanisms of Gq-signaling pathways. Neurosignals 17, 42-54.
( 2009/02/01 )
Haitani, Y., Nakata, M., Sasaki, T., Uchida, A. and Takagi, H. (2009) Engineering of the yeast ubiquitin ligase Rsp5: isolation of a new variant that induces constitutive inactivation of the general amino acid permease Gap1. FEMS Yeast Res 9, 73-86.
( 2009/02/01 )
Ikeda, Y. and Kinoshita, T. (2009) DNA demethylation: a lesson from the garden. Chromosoma 118, 37-41.
( 2009/02/01 )
Kajikawa, M., Hirai, N. and Hashimoto, T. (2009) A PIP-family protein is required for biosynthesis of tobacco alkaloids. Plant Mol Biol 69, 287-298.
( 2009/02/01 )
Shoji, T., Inai, K., Yazaki, Y., Sato, Y., Takase, H., Shitan, N., Yazaki, K., Goto, Y., Toyooka, K., Matsuoka, K. and Hashimoto, T. (2009) Multidrug and toxic compound extrusion-type transporters implicated in vacuolar sequestration of nicotine in tobacco roots. Plant Physiol 149, 708-718.
( 2009/02/01 )
Namihira, M., Kohyama, J., Semi, K., Sanosaka, T., Deneen, B., Taga, T. and Nakashima, K. (2009) Committed neuronal precursors confer astrocytic potential on residual neural precursor cells. Dev Cell 16, 245-255.
( 2009/02/01 )
2009年01月
Shiroshima, T., Oka, C. and Kawaichi, M. (2009) Identification of LRP1B-interacting proteins and inhibition of protein kinase Calpha-phosphorylation of LRP1B by association with PICK1. FEBS Lett 583, 43-48.
( 2009/01/01 )
Kodama, Y., Tamura, T., Hirasawa, W., Nakamura, K. and Sano, H. (2009) A novel protein phosphorylation pathway involved in osmotic-stress response in tobacco plants. Biochimie 91, 533-539.
( 2009/01/01 )
Wiriyathanawudhiwong, N., Ohtsu, I., Li, Z. D., Mori, H. and Takagi, H. (2009) The outer membrane TolC is involved in cysteine tolerance and overproduction in Escherichia coli. Appl Microbiol Biotechnol 81, 903-913.
( 2009/01/01 )
Nakamura, K. and Sano, H. (2009) A plasma-membrane linker for the phosphoinositide-specific phospholipase C in tobacco plants. Plant Signal Behav 4, 26-29.
( 2009/01/01 )