研究業績一覧

Bahtiar, A., Matsumoto, T., Nakamura, T., Akiyama, M., Yogo, K., Ishida-Kitagawa, N., Ogawa, T. and Takeya, T. (2009) Identification of a novel L-serine analog that suppresses osteoclastogenesis in vitro and bone turnover in vivo. J Biol Chem 284, 34157-34166.
( 2009/12/01 )

Fukao, Y., Ferjani, A., Fujiwara, M., Nishimori, Y. and Ohtsu, I. (2009) Identification of zinc-responsive proteins in the roots of Arabidopsis thaliana using a highly improved method of two-dimensional electrophoresis. Plant Cell Physiol 50, 2234-2239.
( 2009/12/01 )

Furuita, K., Murata, S., Jee, J., Ichikawa, S., Matsuda, A. and Kojima, C. (2009) NMR studies of DNA recognition mechanism of HMGB1 protein. Nucleic Acids Symp Ser (Oxf) (53), 89-90.
( 2009/12/01 )

Higuchi, M., Kakimoto, T. and Mizuno, T. (2009) Cytokinin sensing systems using microorganisms. Methods Mol Biol 495, 101-109.
( 2009/12/01 )

Kurita, Y., Onoue, T., Ikeda, A. and Ogasawara, T. (2009) Biomechanical analysis of subjective pinching effort based on tendon-skeletal model. Conf Proc IEEE Eng Med Biol Soc 2009, 5231-5234.
( 2009/12/01 )

Obayashi, C., Tamei, T., Imai, A. and Shibata, T. (2009) Comparison of experts and non-experts in throwing darts based on optimization criteria. Conf Proc IEEE Eng Med Biol Soc 2009, 2647-2650.
( 2009/12/01 )

Tokuda, T., Takeuchi, Y., Noda, T., Sasagawa, K., Nishida, K., Kitaguchi, Y., Fujikado, T., Tano, Y. and Ohta, J. (2009) Light-controlled retinal stimulation on rabbit using CMOS-based flexible multi-chip stimulator. Conf Proc IEEE Eng Med Biol Soc 2009, 646-649.
( 2009/12/01 )

Peng L, Fukao Y, Fujiwara M, Takami T, Shikanai T.(2009) Efficient operation of NAD(P)H dehydrogenase requires supercomplex formation with photosystem I via minor LHCI in Arabidopsis. Plant Cell. 21 (11), 3623-3640.
( 2009/11/01 )

Ohata, E., Tadokoro, R., Sato, Y., Saito, D. and Takahashi, Y. (2009) Notch signal is sufficient to direct an endothelial conversion from non-endothelial somitic cells conveyed to the aortic region by CXCR4. Dev Biol 335, 33-42.
( 2009/11/01 )

Aoyama, T., Hata, S., Nakao, T., Tanigawa, Y., Oka, C. and Kawaichi, M. (2009) Cayman ataxia protein caytaxin is transported by kinesin along neurites through binding to kinesin light chains. J Cell Sci 122, 4177-4185.
( 2009/11/01 )

Kato, J. Y. and Yoneda-Kato, N. (2009) Mammalian COP9 signalosome. Genes Cells 14, 1209-1225.
( 2009/11/01 )

Ukibe, K., Hashida, K., Yoshida, N. and Takagi, H. (2009) Metabolic engineering of Saccharomyces cerevisiae for astaxanthin production and oxidative stress tolerance. Appl Environ Microbiol 75, 7205-7211.
( 2009/11/01 )

Asano, H., Aonuma, M., Sanosaka, T., Kohyama, J., Namihira, M. and Nakashima, K. (2009) Astrocyte differentiation of neural precursor cells is enhanced by retinoic acid through a change in epigenetic modification. Stem Cells 27, 2744-2752.
( 2009/11/01 )

Igawa, T., Hoshino, Y. and Yanagawa, Y. (2009) Isolation and characterization of the plant glsA promoter from Alstroemeria. Plant Biol (Stuttg) 11, 878-885.
( 2009/11/01 )

Nakashima, K., Kohyama, J., Namihira, M., Gage, F. H., Okano, H. and Sawamoto, K. (2009) [Epigenetic mechanisms regulating neural cell fate determination]. No To Hattatsu 41, 411-414.
( 2009/11/01 )

Hiraishi, H., Okada, M., Ohtsu, I. and Takagi, H. (2009) A functional analysis of the yeast ubiquitin ligase Rsp5: the involvement of the ubiquitin-conjugating enzyme Ubc4 and poly-ubiquitination in ethanol-induced down-regulation of targeted proteins. Biosci Biotechnol Biochem 73, 2268-2273.
( 2009/10/01 )

Komiya, R., Yokoi, S. and Shimamoto, K. (2009) A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice. Development 136, 3443-3450.
( 2009/10/01 )

Takagi, H. (2009) [Novel yeast acetyltransferase Mpr1 regulates reactive oxygen species mediated by proline metabolism]. Seikagaku 81, 891-895.
( 2009/10/01 )

Wong, H. L. and Shimamoto, K. (2009) Sending ROS on a bullet train. Sci Signal 2, pe60.
( 2009/09/01 )

Hiraishi, H., Shimada, T., Ohtsu, I., Sato, T. A. and Takagi, H. (2009) The yeast ubiquitin ligase Rsp5 downregulates the alpha subunit of nascent polypeptide-associated complex Egd2 under stress conditions. FEBS J 276, 5287-5297.
( 2009/09/01 )

Kaino, T. and Takagi, H. (2009) Proline as a stress protectant in the yeast Saccharomyces cerevisiae: effects of trehalose and PRO1 gene expression on stress tolerance. Biosci Biotechnol Biochem 73, 2131-2135.
( 2009/09/01 )

Ogawa, T., Nishimura, K., Aoki, T., Takase, H., Tomizawa, K., Ashida, H. and Yokota, A. (2009) A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis. Plant Physiol 151, 114-128.
( 2009/09/01 )

Tsujimura, K., Abematsu, M., Kohyama, J., Namihira, M. and Nakashima, K. (2009) Neuronal differentiation of neural precursor cells is promoted by the methyl-CpG-binding protein MeCP2. Exp Neurol 219, 104-111.
( 2009/09/01 )

Takatsuka, H., Ohno, R. and Umeda, M. (2009) The Arabidopsis cyclin-dependent kinase-activating kinase CDKF;1 is a major regulator of cell proliferation and cell expansion but is dispensable for CDKA activation. Plant J 59, 475-487.
( 2009/08/01 )

Morimoto, T., Ara, K., Ozaki, K. and Ogasawara, N. (2009) A new simple method to introduce marker-free deletions in the Bacillus subtilis genome. Genes Genet Syst 84, 315-318.
( 2009/08/01 )

Rukmana, A., Morimoto, T., Takahashi, H., Giyanto and Ogasawara, N. (2009) Assessment of transcriptional responses of Bacillus subtilis cells to the antibiotic enduracidin, which interferes with cell wall synthesis, using a high-density tiling chip. Genes Genet Syst 84, 253-267.
( 2009/08/01 )

Nakamura, M. and Hashimoto, T. (2009) A mutation in the Arabidopsis gamma-tubulin-containing complex causes helical growth and abnormal microtubule branching. J Cell Sci 122, 2208-2217.
( 2009/07/01 )

Fujiwara, M., Hamada, S., Hiratsuka, M., Fukao, Y., Kawasaki, T. and Shimamoto, K. (2009) Proteome analysis of detergent-resistant membranes (DRMs) associated with OsRac1-mediated innate immunity in rice. Plant Cell Physiol 50, 1191-1200.
( 2009/07/01 )

Ishikawa, R. and Kinoshita, T. (2009) Epigenetic programming: the challenge to species hybridization. Mol Plant 2, 589-599.
( 2009/07/01 )

Iwano, M., Entani, T., Shiba, H., Kakita, M., Nagai, T., Mizuno, H., Miyawaki, A., Shoji, T., Kubo, K., Isogai, A. and Takayama, S. (2009) Fine-tuning of the cytoplasmic Ca2+ concentration is essential for pollen tube growth. Plant Physiol 150, 1322-1334.
( 2009/07/01 )

Tachiki, K., Kodama, Y., Nakayama, H. and Shinmyo, A. (2009) Determination of the in vivo distribution of nuclear matrix attachment regions using a polymerase chain reaction-based assay in Arabidopsis thaliana. J Biosci Bioeng 108, 11-19.
( 2009/07/01 )

Takenouchi, T. and Ishii, S. (2009) A multiclass classification method based on decoding of binary classifiers. Neural Comput 21, 2049-2081.
( 2009/07/01 )

Suzuki, I., Takenouchi, T., Ohira, M., Oba, S. and Ishii, S. (2009) Robust model selection for classification of microarrays. Cancer Inform 7, 141-157.
( 2009/06/01 )

Nakata, A., Urano, D., Fujii-Kuriyama, Y., Mizuno, N., Tago, K. and Itoh, H. (2009) G-protein signalling negatively regulates the stability of aryl hydrocarbon receptor. EMBO Rep 10, 622-628.
( 2009/06/01 )

Iinoya, K., Kotani, T., Sasano, Y. and Takagi, H. (2009) Engineering of the yeast antioxidant enzyme Mpr1 for enhanced activity and stability. Biotechnol Bioeng 103, 341-352.
( 2009/06/01 )

Watanabe, T., Sato, Y., Saito, D., Tadokoro, R. and Takahashi, Y. (2009) EphrinB2 coordinates the formation of a morphological boundary and cell epithelialization during somite segmentation. Proc Natl Acad Sci U S A 106, 7467-7472.
( 2009/05/01 )

Saito, Y., Ashida, H., Sakiyama, T., de Marsac, N. T., Danchin, A., Sekowska, A. and Yokota, A. (2009) Structural and functional similarities between a ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO)-like protein from Bacillus subtilis and photosynthetic RuBisCO. J Biol Chem 284, 13256-13264.
( 2009/05/01 )

Adachi, S., Nobusawa, T. and Umeda, M. (2009) Quantitative and cell type-specific transcriptional regulation of A-type cyclin-dependent kinase in Arabidopsis thaliana. Dev Biol 329, 306-314.
( 2009/05/01 )

Murakami, H., Horihata, M., Andojo, S., Yoneda-Kato, N. and Kato, J. Y. (2009) Isolation and characterization of cytoplasmic cyclin D1 mutants. FEBS Lett 583, 1575-1580.
( 2009/05/01 )

Igawa, T., Fujiwara, M., Takahashi, H., Sawasaki, T., Endo, Y., Seki, M., Shinozaki, K., Fukao, Y. and Yanagawa, Y. (2009) Isolation and identification of ubiquitin-related proteins from Arabidopsis seedlings. J Exp Bot 60, 3067-3073.
( 2009/05/01 )

Hayashi, S., Shimoda, T., Nakajima, M., Tsukada, Y., Sakumura, Y., Dale, J. K., Maroto, M., Kohno, K., Matsui, T. and Bessho, Y. (2009) Sprouty4, an FGF inhibitor, displays cyclic gene expression under the control of the notch segmentation clock in the mouse PSM. PLoS One 4, e5603.
( 2009/05/01 )

Karim, M. R., Hirota, A., Kwiatkowska, D., Tasaka, M. and Aida, M. (2009) A role for Arabidopsis PUCHI in floral meristem identity and bract suppression. Plant Cell 21, 1360-1372.
( 2009/05/01 )

Yoda, H., Fujimura, K., Takahashi, H., Munemura, I., Uchimiya, H. and Sano, H. (2009) Polyamines as a common source of hydrogen peroxide in host- and nonhost hypersensitive response during pathogen infection. Plant Mol Biol 70, 103-112.
( 2009/05/01 )

Ogino, H. and Ochi, H. (2009) Resources and transgenesis techniques for functional genomics in Xenopus. Dev Growth Differ 51, 387-401.
( 2009/05/01 )

Nagano M, Ihara-Ohori Y, Imai H, Inada N, Fujimoto M, Tsutsumi N, Uchimiya H, Kawai-Yamada M.(2009) Functional association of cell death suppressor, Arabidopsis Bax inhibitor-1, with fatty acid 2-hydroxylation through cytochrome b₅. Plant J. 58 (1), 122-134.
( 2009/04/01 )

Fujiwara, Y., Yamashita, O., Kawawaki, D., Doya, K., Kawato, M., Toyama, K. and Sato, M. A. (2009) A hierarchical Bayesian method to resolve an inverse problem of MEG contaminated with eye movement artifacts. Neuroimage 45, 393-409.
( 2009/04/01 )

Kaneda, T., Taga, Y., Takai, R., Iwano, M., Matsui, H., Takayama, S., Isogai, A. and Che, F. S. (2009) The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death. EMBO J 28, 926-936.
( 2009/04/01 )

Iwata, Y., Yoneda, M., Yanagawa, Y. and Koizumi, N. (2009) Characteristics of the nuclear form of the Arabidopsis transcription factor AtbZIP60 during the endoplasmic reticulum stress response. Biosci Biotechnol Biochem 73, 865-869.
( 2009/04/01 )

Uyar, E., Kurokawa, K., Yoshimura, M., Ishikawa, S., Ogasawara, N. and Oshima, T. (2009) Differential binding profiles of StpA in wild-type and h-ns mutant cells: a comparative analysis of cooperative partners by chromatin immunoprecipitation-microarray analysis. J Bacteriol 191, 2388-2391.
( 2009/04/01 )

Yanagitani, K., Imagawa, Y., Iwawaki, T., Hosoda, A., Saito, M., Kimata, Y. and Kohno, K. (2009) Cotranslational targeting of XBP1 protein to the membrane promotes cytoplasmic splicing of its own mRNA. Mol Cell 34, 191-200.
( 2009/04/01 )

Ishikawa, R., Shinomura, T., Takano, M. and Shimamoto, K. (2009) Phytochrome dependent quantitative control of Hd3a transcription is the basis of the night break effect in rice flowering. Genes Genet Syst 84, 179-184.
( 2009/04/01 )

Kodama, Y., Tamura, T., Hirasawa, W., Nakamura, K. and Sano, H. (2009) A novel protein phosphorylation pathway involved in osmotic-stress response in tobacco plants. Biochimie 91, 533-539.
( 2009/04/01 )

Yukinawa, N., Oba, S., Kato, K. and Ishii, S. (2009) Optimal aggregation of binary classifiers for multiclass cancer diagnosis using gene expression profiles. IEEE/ACM Trans Comput Biol Bioinform 6, 333-343.
( 2009/04/01 )

Takahashi, Y., Teshima, K. M., Yokoi, S., Innan, H. and Shimamoto, K. (2009) Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice. Proc Natl Acad Sci U S A 106, 4555-4560.
( 2009/03/01 )

Kohzuma, K., Cruz, J. A., Akashi, K., Hoshiyasu, S., Munekage, Y. N., Yokota, A. and Kramer, D. M. (2009) The long-term responses of the photosynthetic proton circuit to drought. Plant Cell Environ 32, 209-219.
( 2009/03/01 )

Miyashima, S., Hashimoto, T. and Nakajima, K. (2009) ARGONAUTE1 acts in Arabidopsis root radial pattern formation independently of the SHR/SCR pathway. Plant Cell Physiol 50, 626-634.
( 2009/03/01 )

Purwestri, Y. A., Ogaki, Y., Tamaki, S., Tsuji, H. and Shimamoto, K. (2009) The 14-3-3 protein GF14c acts as a negative regulator of flowering in rice by interacting with the florigen Hd3a. Plant Cell Physiol 50, 429-438.
( 2009/03/01 )

Islam, M. S., Tatsumi, K., Okuda, H., Shiosaka, S. and Wanaka, A. (2009) Olig2-expressing progenitor cells preferentially differentiate into oligodendrocytes in cuprizone-induced demyelinated lesions. Neurochem Int 54, 192-198.
( 2009/03/01 )

Minami A, Fujiwara M, Furuto A, Fukao Y, Yamashita T, Kamo M, Kawamura Y, Uemura M.(2009) Alterations in detergent-resistant plasma membrane microdomains in Arabidopsis thaliana during cold acclimation. Plant Cell Physiol. 50 (2), 341-359.
( 2009/02/01 )

Sanosaka, T., Namihira, M. and Nakashima, K. (2009) Epigenetic mechanisms in sequential differentiation of neural stem cells. Epigenetics 4, 89-92.
( 2009/02/01 )

Mizuno, N. and Itoh, H. (2009) Functions and regulatory mechanisms of Gq-signaling pathways. Neurosignals 17, 42-54.
( 2009/02/01 )

Haitani, Y., Nakata, M., Sasaki, T., Uchida, A. and Takagi, H. (2009) Engineering of the yeast ubiquitin ligase Rsp5: isolation of a new variant that induces constitutive inactivation of the general amino acid permease Gap1. FEMS Yeast Res 9, 73-86.
( 2009/02/01 )

Ikeda, Y. and Kinoshita, T. (2009) DNA demethylation: a lesson from the garden. Chromosoma 118, 37-41.
( 2009/02/01 )

Kajikawa, M., Hirai, N. and Hashimoto, T. (2009) A PIP-family protein is required for biosynthesis of tobacco alkaloids. Plant Mol Biol 69, 287-298.
( 2009/02/01 )

Shoji, T., Inai, K., Yazaki, Y., Sato, Y., Takase, H., Shitan, N., Yazaki, K., Goto, Y., Toyooka, K., Matsuoka, K. and Hashimoto, T. (2009) Multidrug and toxic compound extrusion-type transporters implicated in vacuolar sequestration of nicotine in tobacco roots. Plant Physiol 149, 708-718.
( 2009/02/01 )

Namihira, M., Kohyama, J., Semi, K., Sanosaka, T., Deneen, B., Taga, T. and Nakashima, K. (2009) Committed neuronal precursors confer astrocytic potential on residual neural precursor cells. Dev Cell 16, 245-255.
( 2009/02/01 )

Shiroshima, T., Oka, C. and Kawaichi, M. (2009) Identification of LRP1B-interacting proteins and inhibition of protein kinase Calpha-phosphorylation of LRP1B by association with PICK1. FEBS Lett 583, 43-48.
( 2009/01/01 )

Kodama, Y., Tamura, T., Hirasawa, W., Nakamura, K. and Sano, H. (2009) A novel protein phosphorylation pathway involved in osmotic-stress response in tobacco plants. Biochimie 91, 533-539.
( 2009/01/01 )

Wiriyathanawudhiwong, N., Ohtsu, I., Li, Z. D., Mori, H. and Takagi, H. (2009) The outer membrane TolC is involved in cysteine tolerance and overproduction in Escherichia coli. Appl Microbiol Biotechnol 81, 903-913.
( 2009/01/01 )

Nakamura, K. and Sano, H. (2009) A plasma-membrane linker for the phosphoinositide-specific phospholipase C in tobacco plants. Plant Signal Behav 4, 26-29.
( 2009/01/01 )