研究業績の紹介

研究業績の紹介

2019年04月

Yamada T, Habara O, Yoshii Y, Matsushita R, Kubo H, Nojima Y, Nishimura T.(2019) Role of glycogen in development and adult fitness in Drosophila. Development. 2019 Mar 27. pii: dev.176149. doi: 10.1242/dev.176149. [Epub ahead of print]
( 2019/04/10 )

Xu Y, Yamaguchi N, Gan ES, Ito T.(2019) When to stop: an update on molecular mechanisms of floral meristem termination. J Exp Bot. 2019 Mar 27;70(6):1711-1718. doi: 10.1093/jxb/erz048.
( 2019/04/10 )

Watanabe D, Tashiro S, Shintani D, Sugimoto Y, Iwami A, Kajiwara Y, Takashita H, Takagi H.(2019) Loss of Rim15p in shochu yeast alters carbon utilization during barley shochu fermentation. Biosci Biotechnol Biochem. 2019 Mar 22:1-4. doi: 10.1080/09168451.2019.1594679. [Epub ahead of print]
( 2019/04/10 )

Maeda K, Kunieda T, Tamura K, Hatano K, Hara-Nishimura I, Shimada T.(2019) Identification of periplasmic root-cap mucilage in developing columella cells of Arabidopsis thaliana. Plant Cell Physiol. 2019 Mar 20. pii: pcz047. doi: 10.1093/pcp/pcz047. [Epub ahead of print]
( 2019/04/10 )

Oide S, Tanaka Y, Watanabe A, Inui M.(2019) Carbohydrate-binding property of a cell wall integrity and stress response component (WSC) domain of an alcohol oxidase from the rice blast pathogen Pyricularia oryzae. Enzyme Microb Technol. 2019 Jun;125:13-20. doi: 10.1016/j.enzmictec.2019.02.009. Epub 2019 Feb 25.
( 2019/04/10 )

Sekiyama K, Ushiro Y, Kurisaki A, Funaba M, Hashimoto O.(2019) Activin E enhances insulin sensitivity and thermogenesis by activating brown/beige adipocytes. J Vet Med Sci. 2019 Mar 15. doi: 10.1292/jvms.19-0036. [Epub ahead of print]
( 2019/04/10 )

Tsuge Y, Kato N, Yamamoto S, Suda M, Jojima T, Inui M.(2019) Metabolic engineering of Corynebacterium glutamicum for hyperproduction of polymer-grade L- and D-lactic acid. Appl Microbiol Biotechnol. 2019 Apr;103(8):3381-3391. doi: 10.1007/s00253-019-09737-8. Epub 2019 Mar 15.
( 2019/04/10 )

Kubo M, Nishiyama T, Tamada Y, Sano R, Ishikawa M, Murata T, Imai A, Lang D, Demura T, Reski R, Hasebe M.(2019) Single-cell transcriptome analysis of Physcomitrella leaf cells during reprogramming using microcapillary manipulation. Nucleic Acids Res. 2019 Mar 15. pii: gkz181. doi: 10.1093/nar/gkz181. [Epub ahead of print]
( 2019/04/10 )

Xie MJ, Ishikawa Y, Yagi H, Iguchi T, Oka Y, Kuroda K, Iwata K, Kiyonari H, Matsuda S, Matsuzaki H, Yuzaki M, Fukazawa Y, Sato M.(2019) PIP3-Phldb2 is crucial for LTP regulating synaptic NMDA and AMPA receptor density and PSD95 turnover. Sci Rep. 2019 Mar 13;9(1):4305. doi: 10.1038/s41598-019-40838-6.
( 2019/04/10 )

Wu J, Ichihashi Y, Suzuki T, Shibata A, Shirasu K, Yamaguchi N, Ito T.(2019) Abscisic acid-dependent histone demethylation during post-germination growth arrest in Arabidopsis. Plant Cell Environ. 2019 Mar 12. doi: 10.1111/pce.13547. [Epub ahead of print]
( 2019/04/10 )

Mellor N, Vaughan-Hirsch J, Kümpers BMC, Help-Rinta-Rahko H, Miyashima S, Mähönen AP, Campilho A, King JR, Bishopp A.(2019) A core mechanism for specifying root vascular patterning can replicate the anatomical variation seen in diverse plant species. Development. 2019 Mar 15;146(6). pii: dev172411. doi: 10.1242/dev.172411.
( 2019/04/10 )

Sato Y, Matoba R, Kato K.(2019) Recent Advances in Liquid Biopsy in Precision Oncology Research. Biol Pharm Bull. 2019;42(3):337-342. doi: 10.1248/bpb.b18-00804.
( 2019/04/10 )

2019年03月

Sok SPM, Ori D, Nagoor NH, Kawai T.(2019) Sensing Self and Non-Self DNA by Innate Immune Receptors and Their Signaling Pathways. Crit Rev Immunol. 2018;38(4):279-301. doi: 10.1615/CritRevImmunol.2018026540.
( 2019/03/05 )

Kawasaki T, Kawai T.(2019) Discrimination Between Self and Non-Self-Nucleic Acids by the Innate Immune System. Int Rev Cell Mol Biol. 2019;344:1-30. doi: 10.1016/bs.ircmb.2018.08.004. Epub 2018 Oct 26.
( 2019/03/05 )

Ferrari C, Proost S, Janowski M, Becker J, Nikoloski Z, Bhattacharya D, Price D, Tohge T, Bar-Even A, Fernie A, Stitt M, Mutwil M.(2019) Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida. Nat Commun. 2019 Feb 13;10(1):737. doi: 10.1038/s41467-019-08703-2.
( 2019/03/05 )

Huang L, Urasaki A, Inagaki N.(2019) Rab33a and Rab33ba mediate the outgrowth of forebrain commissural axons in the zebrafish brain. Sci Rep. 2019 Feb 12;9(1):1799. doi: 10.1038/s41598-018-38468-5.
( 2019/03/05 )

Takatsuka H, Umeda M.(2019) ABA inhibits root cell elongation through repressing the cytokinin signaling. Plant Signal Behav. 2019 Feb 9:1-3. doi: 10.1080/15592324.2019.1578632. [Epub ahead of print]
( 2019/03/05 )

Ahmed R, Ashimori A, Iwamoto S, Matsui T, Nakahata Y, Bessho Y.(2019) Replicative senescent human cells possess altered circadian clocks with a prolonged period and delayed peak-time. Aging (Albany NY). 2019 Feb 9;11(3):950-973. doi: 10.18632/aging.101794.
( 2019/03/05 )

Casartelli A, Melino VJ, Baumann U, Riboni M, Suchecki R, Jayasinghe NS, Mendis H, Watanabe M, Erban A, Zuther E, Hoefgen R, Roessner U, Okamoto M, Heuer S.(2019) Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Mol Biol. 2019 Feb 5. doi: 10.1007/s11103-019-00831-z. [Epub ahead of print]
( 2019/03/05 )

Kobayashi K(2019) Inactivation of cysL inhibits biofilm formation by activating the disulfide stress regulator Spx in Bacillus subtilis. J Bacteriol. 2019 Feb 4. pii: JB.00712-18. doi: 10.1128/JB.00712-18. [Epub ahead of print]
( 2019/03/05 )

2019年02月

Naoki H, Akiyama R, Sari DWK, Ishii S, Bessho Y, Matsui T.(2019) Noise-resistant developmental reproducibility in vertebrate somite formation. PLoS Comput Biol. 2019 Feb 4;15(2):e1006579. doi: 10.1371/journal.pcbi.1006579. eCollection 2019 Feb.
( 2019/02/06 )

Takagi H.(2019) Metabolic regulatory mechanisms and physiological roles of functional amino acids and their applications in yeast. Biosci Biotechnol Biochem. 2019 Feb 2:1-14. doi: 10.1080/09168451.2019.1576500. [Epub ahead of print]
( 2019/02/06 )

Nguyen PTM, Ishiwata-Kimata Y, Kimata Y.(2019) Monitoring ADP/ATP ratio in yeast cells using the fluorescent-protein reporter PercevalHR. Biosci Biotechnol Biochem. 2019 Jan 31:1-5. doi: 10.1080/09168451.2019.1574204. [Epub ahead of print]
( 2019/02/06 )

Smet W, Sevilem I, de Luis Balaguer MA, Wybouw B, Mor E, Miyashima S, Blob B, Roszak P, Jacobs TB, Boekschoten M, Hooiveld G, Sozzani R, Helariutta Y, De Rybel B.(2019) DOF2.1 Controls Cytokinin-Dependent Vascular Cell Proliferation Downstream of TMO5/LHW. Curr Biol. 2019 Feb 4;29(3):520-529.e6. doi: 10.1016/j.cub.2018.12.041. Epub 2019 Jan 24.
( 2019/02/06 )

Mutuku JM, Cui S, Hori C, Takeda Y, Tobimatsu Y, Nakabayashi R, Mori T, Saito K, Demura T, Umezawa T, Yoshida S, Shirasu K.(2019) The structural integrity of lignin is crucial for resistance against Striga hermonthica parasitism in rice. Plant Physiol. 2019 Jan 22. pii: pp.01133.2018. doi: 10.1104/pp.18.01133. [Epub ahead of print]
( 2019/02/06 )

Nakamura J, Sato Y, Kitai Y, Wajima S, Yamamoto S, Oguchi A, Yamada R, Kaneko K, Kondo M, Uchino E, Tsuchida J, Hirano K, Sharma K, Kohno K, Yanagita M.(2019) Myofibroblasts acquire retinoic acid-producing ability during fibroblast-to-myofibroblast transition following kidney injury. Kidney Int. 2019 Jan 16. pii: S0085-2538(18)30806-8. doi: 10.1016/j.kint.2018.10.017. [Epub ahead of print]
( 2019/02/06 )

Ikeda T, Tanaka W, Toriba T, Suzuki C, Maeno A, Tsuda K, Shiroishi T, Kurata T, Sakamoto T, Murai M, Matsusaka H, Kumamaru T, Hirano HY.(2019) BELL1-like homeobox genes regulate inflorescence architecture and meristem maintenance in rice. Plant J. 2019 Jan 18. doi: 10.1111/tpj.14230. [Epub ahead of print]
( 2019/02/06 )

Kimata Y, Kato T, Higaki T, Kurihara D, Yamada T, Segami S, Morita MT, Maeshima M, Hasezawa S, Higashiyama T, Tasaka M, Ueda M. (2019) Polar vacuolar distribution is essential for accurate asymmetric division of Arabidopsis zygotes. Proc Natl Acad Sci U S A. 2019 Jan 16. pii: 201814160. doi: 10.1073/pnas.1814160116. [Epub ahead of print]
( 2019/02/06 )

Seto Y, Yasui R, Kameoka H, Tamiru M, Cao M, Terauchi R, Sakurada A, Hirano R, Kisugi T, Hanada A, Umehara M, Seo E, Akiyama K, Burke J, Takeda-Kamiya N, Li W, Hirano Y, Hakoshima T, Mashiguchi K, Noel JP, Kyozuka J, Yamaguchi S.(2019) Strigolactone perception and deactivation by a hydrolase receptor DWARF14. Nat Commun. 2019 Jan 14;10(1):191. doi: 10.1038/s41467-018-08124-7.
( 2019/02/06 )

2019年01月

Miyashima S, Roszak P, Sevilem I, Toyokura K, Blob B, Heo JO, Mellor N, Help-Rinta-Rahko H, Otero S, Smet W, Boekschoten M, Hooiveld G, Hashimoto K, Smetana O, Siligato R, Wallner ES, Mähönen AP, Kondo Y, Melnyk CW, Greb T, Nakajima K, Sozzani R, Bishopp A, De Rybel B, Helariutta Y.(2019) Mobile PEAR transcription factors integrate positional cues to prime cambial growth. Nature. 2019 Jan 9. doi: 10.1038/s41586-018-0839-y. [Epub ahead of print]
( 2019/01/17 )

Matz JM, Watanabe M, Falade M, Tohge T, Hoefgen R, Matuschewski K.(2019) Plasmodium Para-Aminobenzoate Synthesis and Salvage Resolve Avoidance of Folate Competition and Adaptation to Host Diet. Cell Rep. 2019 Jan 8;26(2):356-363.e4. doi: 10.1016/j.celrep.2018.12.062.
( 2019/01/17 )

Matsumura T, Endo T, Isotani A, Ogawa M, Ikawa M.(2019) An azoospermic factor gene, Ddx3y and its paralog, Ddx3x are dispensable in germ cells for male fertility. J Reprod Dev. 2019 Jan 7. doi: 10.1262/jrd.2018-145. [Epub ahead of print]
( 2019/01/17 )

Hisanaga T, Okahashi K, Yamaoka S, Kajiwara T, Nishihama R, Shimamura M, Yamato KT, Bowman JL, Kohchi T, Nakajima K.(2019) A cis-acting bidirectional transcription switch controls sexual dimorphism in the liverwort. EMBO J. 2019 Jan 4. pii: e100240. doi: 10.15252/embj.2018100240. [Epub ahead of print]
( 2019/01/17 )

Wong KL, Akiyama R, Bessho Y, Matsui T.(2018) ERK Activity Dynamics during Zebrafish Embryonic Development. Int J Mol Sci. 2018 Dec 28;20(1). pii: E109. doi: 10.3390/ijms20010109.
( 2019/01/17 )

Toyokura K, Goh T, Shinohara H, Shinoda A, Kondo Y, Okamoto Y, Uehara T, Fujimoto K, Okushima Y, Ikeyama Y, Nakajima K, Mimura T, Tasaka M, Matsubayashi Y, Fukaki H.(2018) Lateral Inhibition by a Peptide Hormone-Receptor Cascade during Arabidopsis Lateral Root Founder Cell Formation. Dev Cell. 2019 Jan 7;48(1):64-75.e5. doi: 10.1016/j.devcel.2018.11.031. Epub 2018 Dec 20.
( 2019/01/17 )

Dateyama I, Sugihara Y, Chiba S, Ota R, Nakagawa R, Kobayashi T, Itoh H.(2018) RABL2 positively controls localization of GPCRs in mammalian primary cilia. J Cell Sci. 2018 Dec 21. pii: jcs.224428. doi: 10.1242/jcs.224428. [Epub ahead of print]
( 2019/01/17 )

Maruyama AT, Komai S.(2018) Auditory-induced response in the primary sensory cortex of rodents. PLoS One. 2018 Dec 20;13(12):e0209266. doi: 10.1371/journal.pone.0209266. eCollection 2018.
( 2019/01/17 )

Kim SY, Hakoshima T.(2019) GST Pull-Down Assay to Measure Complex Formations. Methods Mol Biol. 2019;1893:273-280. doi: 10.1007/978-1-4939-8910-2_20.
( 2019/01/17 )

Sakamoto T, Tsujimoto-Inui Y, Sotta N, Hirakawa T, Matsunaga TM, Fukao Y, Matsunaga S, Fujiwara T.(2018) Proteasomal degradation of BRAHMA promotes Boron tolerance in Arabidopsis. Nat Commun. 2018 Dec 11;9(1):5285. doi: 10.1038/s41467-018-07393-6.
( 2019/01/17 )

Yamaguchi N, Huang J, Tatsumi Y, Abe M, Sugano SS, Kojima M, Takebayashi Y, Kiba T, Yokoyama R, Nishitani K, Sakakibara H, Ito T.(2018) Chromatin-mediated feed-forward auxin biosynthesis in floral meristem determinacy. Nat Commun. 2018 Dec 11;9(1):5290. doi: 10.1038/s41467-018-07763-0.
( 2019/01/17 )

Krahmer J, Goralogia GS, Kubota A, Zardilis A, Johnson RS, Song YH, MacCoss MJ, Le Bihan T, Halliday KJ, Imaizumi T, Millar AJ.(2018) Time-resolved interaction proteomics of the GIGANTEA protein under diurnal cycles in Arabidopsis. FEBS Lett. 2018 Dec 7. doi: 10.1002/1873-3468.13311. [Epub ahead of print]
( 2019/01/17 )

Shahrizal M, Daimon Y, Tanaka Y, Hayashi Y, Nakayama S, Iwaki S, Narita SI, Kamikubo H, Akiyama Y, Tsukazaki T.(2018) Structural Basis for the Function of the β-Barrel Assembly-Enhancing Protease BepA. J Mol Biol. 2018 Dec 3. pii: S0022-2836(18)31008-8. doi: 10.1016/j.jmb.2018.11.024. [Epub ahead of print]
( 2019/01/17 )

Hagiwara D, Takahashi H, Takagi H, Watanabe A, Kamei K.(2018) Heterogeneity in Pathogenicity-related Properties and Stress Tolerance in Aspergillus fumigatus Clinical Isolates. Med Mycol J. 2018;59(4):E63-E70. doi: 10.3314/mmj.18-00007.
( 2019/01/17 )

Chek MF, Hiroe A, Hakoshima T, Sudesh K, Taguchi S.(2018) PHA synthase (PhaC): interpreting the functions of bioplastic-producing enzyme from a structural perspective. Appl Microbiol Biotechnol. 2018 Dec 3. doi: 10.1007/s00253-018-9538-8. [Epub ahead of print]
( 2019/01/17 )