研究業績の紹介

研究業績の紹介

2011年12月

2011年11月

2011年10月

2011年09月

Shiosaka S, Ishikawa Y.(2011) Neuropsin--a possible modulator of synaptic plasticity. J Chem Neuroanat. 2011 42 (1), 24-29
( 2011/09/01 )

Shoji T, Hashimoto T.(2011) Recruitment of a duplicated primary metabolism gene into the nicotine biosynthesis regulon in tobacco. Plant J. 67 (6), 949-959
( 2011/09/01 )

Chung K, Tasaka M.(2011) RPT2a, a 26S proteasome AAA-ATPase, is Directly Involved in Arabidopsis CC-NBS-LRR Protein uni-1D-Induced Signaling Pathways. Plant Cell Physiol. 52 (9), 1657-1664
( 2011/09/01 )

Kim W, Matsui T, Yamao M, Ishibashi M, Tamada K, Takumi T, Kohno K, Oba S, Ishii S, Sakumura Y, Bessho Y.(2011) The period of the somite segmentation clock is sensitive to Notch activity. Mol Biol Cell. 22 (18), 3541-3549
( 2011/09/01 )

Promlek T, Ishiwata-Kimata Y, Shido M, Sakuramoto M, Kohno K, Kimata Y.(2011) Membrane aberrancy and unfolded proteins activate the endoplasmic reticulum stress sensor Ire1 in different ways. Mol Biol Cell. 22 (18), 3520-3532
( 2011/09/01 )

Bahtiar A, Nakamura T, Kishida K, Katsura J, Nitta M, Ishida-Kitagawa N, Ogawa T, Takeya T.(2011) The l-Ser analog #290 promotes bone recovery in OP and RA mice. Pharmacol Res. 64 (3), 203-209
( 2011/09/01 )

Fukao Y, Ferjani A.(2011) V-ATPase dysfunction under excess zinc inhibits Arabidopsis cell expansion. Plant Signal Behav. 6 (9), 1253-1255.
( 2011/09/01 )

Ikeda Y, Kinoshita Y, Susaki D, Ikeda Y, Iwano M, Takayama S, Higashiyama T, Kakutani T, Kinoshita T.(2011) HMG Domain Containing SSRP1 Is Required for DNA Demethylation and Genomic Imprinting in Arabidopsis. Dev Cell. 21 (3), 589-596
( 2011/09/01 )

Hirano H, Shinmyo A, Sekine M.(2011) Both negative and positive G1 cell cycle regulators undergo proteasome-dependent degradation during sucrose starvation in Arabidopsis. Plant Signal Behav. 6 (9), 1394-1396
( 2011/09/01 )

Takahashi Y, Shimamoto K.(2011) Heading date 1 (Hd1), an ortholog of Arabidopsis CONSTANS, is a possible target of human selection during domestication to diversify flowering times of cultivated rice. Genes Genet Syst. 86 (3), 175-182
( 2011/09/01 )

2011年08月

2011年07月

2011年06月

Kundu L. R.,Seki M.,Watanabe N.,Murofushi H.,Furukohri A.,Waga S.,Score A. J.,Blow J. J.,Horikoshi M.,Enomoto T.,Tada S. (2011) Biphasic chromatin binding of histone chaperone FACT during eukaryotic chromatin DNA replication. Biochim Biophys Acta 1813(6):1129-36
( 2011/06/01 )

Hirano H.,Shinmyo A.,Sekine M.(2011) Arabidopsis G1 cell cycle proteins undergo proteasome-dependent degradation during sucrose starvation. Plant Physiol Biochem 49 (6), 687-691.
( 2011/06/01 )

Sanda S, Yoshida K, Kuwano M, Kawamura T, Munekage YN, Akashi K, Yokota A.(2011) Responses of the photosynthetic electron transport system to excess light energy caused by water deficit in wild watermelon. Physiol Plant 142 (3), 247-264.
( 2011/06/01 )

Takeda S.,Hanano K.,Kariya A.,Shimizu S.,Zhao L.,Matsui M.,Tasaka M.,Aida M.(2011) CUP-SHAPED COTYLEDON1 transcription factor activates the expression of LSH4 and LSH3, two members of the ALOG gene family, in shoot organ boundary cells. Plant J 66 (6), 1066-1077
( 2011/06/01 )

Ishikawa, R. ;Aoki, M. ;Kurotani, K. I. ;Yokoi, S. ;Shinomura, T. ;Takano, M. ;Shimamoto, K. (2011) Phytochrome B regulates Heading date 1 (Hd1)-mediated expression of rice florigen Hd3a and critical day length in rice. Mol Genet Genomics 285, 461-470
( 2011/06/01 )

Kusuya Y, Kurokawa K, Ishikawa S, Ogasawara N, Oshima T.(2011) Transcription factor GreA contributes to resolve promoter proximal pausing of RNA polymerase in Bacillus subtilis cells. J Bacteriol 193 (12), 3090-3099.
( 2011/06/01 )

Inagaki N.,Toriyama M.,Sakumura Y. (2011) Systems biology of symmetry breaking during neuronal polarity formation. Dev Neurobiol 71, 584-593
( 2011/06/01 )

Miyashima, S. ;Koi, S. ;Hashimoto, T. ;Nakajima, K. (2011) Non-cell-autonomous microRNA165 acts in a dose-dependent manner to regulate multiple differentiation status in the Arabidopsis root. Development 138, 2303-2313
( 2011/06/01 )

Adachi S, Minamisawa K, Okushima Y, Inagaki S, Yoshiyama K, Kondou Y, Kaminuma E, Kawashima M, Toyoda T, Matsui M, Kurihara D, Matsunaga S, Umeda M.(2011) Programmed induction of endoreduplication by DNA double-strand breaks in Arabidopsis. Proc Natl Acad Sci U S A. 108 (24), 10004-10009
( 2011/06/01 )

Hirano Y, Hatano T, Takahashi A, Toriyama M, Inagaki N, Hakoshima T.(2011) Structural basis of cargo recognition by the myosin-X MyTH4-FERM domain. EMBO J. 30 (13), 2734-2747
( 2011/06/01 )

Matsui T, Thitamadee S, Murata T, Kakinuma H, Nabetani T, Hirabayashi Y, Hirate Y, Okamoto H, Bessho Y.(2011) Canopy1, a positive feedback regulator of FGF signaling, controls progenitor cell clustering during Kupffer's vesicle organogenesis. Proc Natl Acad Sci U S A. 108 (24), 9881-9886
( 2011/06/01 )

Shoji T, Hashimoto T.(2011) Tobacco MYC2 regulates jasmonate-inducible nicotine biosynthesis genes directly and by way of the NIC2-locus ERF genes. Plant Cell Physiol. 52 (6), 1117-1130
( 2011/06/01 )

2011年05月

Nakamura M, Toyota M, Tasaka M, Morita MT.(2011) An Arabidopsis E3 Ligase, SHOOT GRAVITROPISM9, Modulates the Interaction between Statoliths and F-Actin in Gravity Sensing. Plant Cell 23 (5), 1830-1848.
( 2011/05/20 )

Matsui T, Nomura Y, Takano M, Imai S, Nakayama H, Miyasaka H, Okuhata H, Tanaka S, Matsuura H, Harada K, Bamba T, Hirata K, Kato K.(2011) Molecular Cloning and Partial Characterization of a Peroxidase Gene Expressed in the Roots of Portulaca oleracea cv., One Potentially Useful in the Remediation of Phenolic Pollutants. Biosci Biotechnol Biochem 75 (5), 882-890.
( 2011/05/20 )

Yamaguchi M.,Mitsuda N.,Ohtani M.,Ohme-Takagi M.,Kato K.,Demura T. (2011) VASCULAR-RELATED NAC-DOMAIN 7 directly regulates the expression of a broad range of genes for xylem vessel formation. Plant J 66, 579-590
( 2011/05/01 )

Banks JA, et al.,(2011) The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science. 332 (6032), 960-963.
( 2011/05/01 )

Akashi, K., Yoshida, K., Kuwano, M., Kajikawa, M., Yoshimura, K., Hoshiyasu, S., Inagaki, N. and Yokota, A. (2011) Dynamic changes in the leaf proteome of a C(3) xerophyte, Citrullus lanatus (wild watermelon), in response to water deficit. Planta 233(5):947-960
( 2011/05/01 )

Yokota Y.,Saito D.,Tadokoro R.,Takahashi Y. (2011) Genomically integrated transgenes are stably and conditionally expressed in neural crest cell-specific lineages. Dev Biol 15;353(2):382-95
( 2011/05/01 )

Uchida N.,Igari K.,Bogenschutz N. L.,Torii K. U.,Tasaka M.(2011) Arabidopsis ERECTA-family Receptor Kinases Mediate Morphological Alterations Stimulated by Activation of NB-LRR-type UNI proteins. Plant Cell Physiol 52 (5), 804-814.
( 2011/05/01 )

Furutani M., Sakamoto N., Yoshida S., Kajiwara T., Robert H.S., Friml J. and Tasaka M. (2011) Polar localized NPH3-like proteins regulate polarity and endocytosis of PIN-FORMED, auxin efflux carriers. Development 138, 2069-2078
( 2011/05/01 )

Morita, Y. ;Ono, A. ;Serizawa, A. ;Yogo, K. ;Ishida-Kitagawa, N. ;Takeya, T. ;Ogawa, T. (2011) Purification and identification of lactoperoxidase in milk basic proteins as an inhibitor of osteoclastogenesis. J Dairy Sci 94, 2270-2279
( 2011/05/01 )

Hashimoto T.(2011) [Microtubule cytoskeleton determines plant shape]. Seikagaku. 83 (5), 374-378
( 2011/05/01 )

2011年04月

Furuita K.,Murata S.,Jee J. G.,Ichikawa S.,Matsuda A.,Kojima C. (2011) Structural Feature of Bent DNA Recognized by HMGB1. J Am Chem Soc 133, 5788-5790
( 2011/04/20 )

Yamamoto H, Peng L, Fukao Y, Shikanai T.(2011) An Src homology 3 domain-like fold protein forms a ferredoxin binding site for the chloroplast NADH dehydrogenase-like complex in Arabidopsis. Plant Cell. 23 (4), 1480-1493.
( 2011/04/01 )

Peng L, Fukao Y, Myouga F, Motohashi R, Shinozaki K, Shikanai T.(2011) A chaperonin subunit with unique structures is essential for folding of a specific substrate. PLoS Biol. 9 (4), e1001040.
( 2011/04/01 )

Fukao Y.,Ferjani A.,Tomioka R.,Nagasaki N.,Kurata R.,Nishimori Y.,Fujiwara M.,Maeshima M. (2011) iTRAQ Analysis Reveals Mechanisms of Growth Defects Due to Excess Zinc in Arabidopsis. Plant Physiol 155, 1893-1907
( 2011/04/01 )

Kajikawa M.,Shoji T.,Kato A.,Hashimoto T. (2011) Vacuole-localized berberine bridge enzyme-like proteins are required for a late step of nicotine biosynthesis in tobacco. Plant Physiol 155, 2010-2022
( 2011/04/01 )

Uchida N.,Sakamoto T.,Kurata T.,Tasaka M. (2011) Identification of EMS-induced Causal Mutations in A Nonreference Arabidopsis thaliana Accession by Whole Genome Sequencing. Plant Cell Physiol 52, 716-722
( 2011/04/01 )

Yoshino, T., Saito, D., Tadokoro, R., Takahashi,Y. (2011) In vivo gene manipulations of epithelial cell sheets: a novel model to study epithelial-to-mesenchymal transition. Dev Growth Differ 53, 378-388
( 2011/04/01 )

Shimokita, E., Takahashi, Y (2011) Secondary neurulation: fate-mapping and gene manipulation of the neural tube in tail bud. Dev Growth Differ 53, 401-410
( 2011/04/01 )

Kimata Y.,Kohno K. (2010) Endoplasmic reticulum stress-sensing mechanisms in yeast and mammalian cells. Curr Opin Cell Biol 23, 135-142
( 2011/04/01 )

2011年03月

Han S. I.,Yasuda K.,Kataoka K. (2011) ATF2 Interacts with {beta}-Cell-enriched Transcription Factors, MafA, Pdx1, and Beta2, and Activates Insulin Gene Transcription. J Biol Chem 286, 10449-10456
( 2011/03/25 )

Sato M.,Maruoka M.,Yokota N.,Kuwano M.,Matsui A.,Inada M.,Ogawa T.,Ishida-Kitagawa N.,Takeya T. (2011) Identification and functional analysis of a new phosphorylation site (Y398) in the SH3 domain of Abi-1. FEBS Lett 585, 834-840
( 2011/03/23 )

Ito, J., Sono, T., Tasaka, M. and Furutani, M. (2011) MACCHI-BOU 2 Is Required for Early Embryo Patterning and Cotyledon Organogenesis in Arabidopsis. Plant Cell Physiol 52, 539-552
( 2011/03/01 )

Ishikawa R.,Ohnishi T.,Kinoshita Y.,Eiguchi M.,Kurata N.,Kinoshita T. (2011) Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division. Plant J 65, 798-806
( 2011/03/01 )

Takeda S.,Aida M. (2011) Establishment of the embryonic shoot apical meristem in Arabidopsis thaliana. J Plant Res 124, 211-219
( 2011/03/01 )

Horie T.,Sugawara M.,Okada T.,Taira K.,Kaothien-Nakayama P.,Katsuhara M.,Shinmyo A.,Nakayama H. (2011) Rice sodium-insensitive potassium transporter, OsHAK5, confers increased salt tolerance in tobacco BY2 cells. J Biosci Bioeng 111, 346-356
( 2011/03/01 )

Ishikawa R.,Ohnishi T.,Kinoshita Y.,Eiguchi M.,Kurata N.,Kinoshita T.(2011) Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division. Plant J 65 (5), 798-806.
( 2011/03/01 )

Takeda S.,Aida M.(2011) Establishment of the embryonic shoot apical meristem in Arabidopsis thaliana. J Plant Res 124 (2), 211-219.
( 2011/03/01 )

2011年02月

Bao, X., Ogawa, T., Se, S., Akiyama, M., Bahtiar, A., Takeya, T. and Ishida-Kitagawa, N. (2011) Acid sphingomyelinase regulates osteoclastogenesis by modulating sphingosine kinases downstream of RANKL signaling. Biochem Biophys Res Commun 405, 533-537
( 2011/02/25 )

Yanagitani K.,Kimata Y.,Kadokura H.,Kohno K. (2011) Translational pausing ensures membrane targeting and cytoplasmic splicing of XBP1u mRNA. Science 331, 586-589
( 2011/02/04 )

Gundogdu M. E.,Kawai Y.,Pavlendova N.,Ogasawara N.,Errington J.,Scheffers D. J.,Hamoen L. W. (2011) Large ring polymers align FtsZ polymers for normal septum formation. Embo J 30, 617-626
( 2011/02/02 )

Matsui, T., Tabayashi, A., Iwano, M., Shinmyo, A., Kato, K. and Nakayama, H. (2011) Activity of C-terminal-Dependent Vacuolar Sorting Signal of Horseradish Peroxidase C1a is Enhanced by its Secondary Structure. Plant Cell Physiol 52, 413-420
( 2011/02/01 )

Ohki I.,Amida H.,Yamada R.,Sugihara M.,Ishigaki T.,Tate S. (2011) Surface plasmon resonance study on functional significance of clustered organization of lectin-like oxidized LDL receptor (LOX-1). Biochim Biophys Acta 1814, 345-354
( 2011/02/01 )

Toyota M.,Matsuda K.,Kakutani T.,Terao Morita M.,Tasaka M. (2011) Developmental changes in crossover frequency in Arabidopsis. Plant J 65, 589-599
( 2011/02/01 )

Tsuji H.,Taoka K.,Shimamoto K. (2011) Regulation of flowering in rice: two florigen genes, a complex gene network, and natural variation. Curr Opin Plant Biol 14, 45-52
( 2011/02/01 )

Obayashi T.,Nishida K.,Kasahara K.,Kinoshita K. (2011) ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants. Plant Cell Physiol 52, 213-219
( 2011/02/01 )

Ueda M.,Zhang Z.,Laux T.(2011) Transcriptional activation of Arabidopsis axis patterning genes WOX8/9 links zygote polarity to embryo development. Dev Cell 20 (2), 264-270
( 2011/02/01 )

Toyota M.,Matsuda K.,Kakutani T.,Terao Morita M.,Tasaka M.(2011) Developmental changes in crossover frequency in Arabidopsis. Plant J 65 (4), 589-599.
( 2011/02/01 )

2011年01月

Tsuda E.,Yang H.,Nishimura T.,Uehara Y.,Sakai T.,Furutani M.,Koshiba T.,Hirose M.,Nozaki H.,Murphy A. S.,Hayashi K. (2011) Alkoxy-auxins are selective inhibitors of auxin transport mediated by PIN, ABCB, and AUX1 transporters. J Biol Chem 286, 2354-2364
( 2011/01/21 )

Kobayashi T.,Ishida J.,Musashi M.,Ota S.,Yoshida T.,Shimizu Y.,Chuma M.,Kawakami H.,Asaka M.,Tanaka J.,Imamura M.,Kobayashi M.,Itoh H.,Edamatsu H.,Sutherland L. C.,Brachmann R. K. (2011) p53 transactivation is involved in the antiproliferative activity of the putative tumor suppressor RBM5. Int J Cancer 128, 304-318
( 2011/01/15 )

Chumsakul, O., Takahashi, H., Oshima, T., Hishimoto, T., Kanaya, S., Ogasawara, N. and Ishikawa, S. (2011) Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation. Nucleic Acids Res 39, 414-428.
( 2011/01/01 )

Nakamura, D., Tsuru, A., Ikegami, K., Imagawa, Y., Fujimoto, N. and Kohno, K. (2011) Mammalian ER stress sensor IRE1beta specifically down-regulates the synthesis of secretory pathway proteins. FEBS Lett 585, 133-138.
( 2011/01/01 )

Yoshida N.,Hayasaki T.,Takagi H.(2011) Gene expression analysis of methylotrophic oxidoreductases involved in the oligotrophic growth of Rhodococcus erythropolis N9T-4. Biosci Biotechnol Biochem 75 (1), 123-127.
( 2011/01/01 )

Hung, K. W., Nakao, M., Yoshimura, K. and Minato, K. (2011) Background-incorporated volumetric model for patient-specific surgical simulation: a segmentation-free, modeling-free framework. Int J Comput Assist Radiol Surg 6, 35-45.
( 2011/01/01 )

Hou, X., Omi, M., Harada, H., Ishii, S., Takahashi, Y. and Nakamura, H. (2011) Conditional knockdown of target gene expression by tetracycline regulated transcription of double strand RNA. Dev Growth Differ 53, 69-75.
( 2011/01/01 )

Yabu M.,Shime H.,Hara H.,Saito T.,Matsumoto M.,Seya T.,Akazawa T.,Inoue N. (2011) IL-23-dependent and -independent enhancement pathways of IL-17A production by lactic acid. Int Immunol 23, 29-41
( 2011/01/01 )

Horiguchi G.,Nakayama H.,Ishikawa N.,Kubo M.,Demura T.,Fukuda H.,Tsukaya H. (2011) ANGUSTIFOLIA3 plays roles in adaxial/abaxial patterning and growth in leaf morphogenesis. Plant Cell Physiol 52, 112-124
( 2011/01/01 )

Takahashi H.,Morioka R.,Ito R.,Oshima T.,Altaf-Ul-Amin M.,Ogasawara N.,Kanaya S. (2011) Dynamics of time-lagged gene-to-metabolite networks of Escherichia coli elucidated by integrative omics approach. Omics 15, 15-23
( 2011/01/01 )

Takahashi H.,Morioka R.,Ito R.,Oshima T.,Altaf-Ul-Amin M.,Ogasawara N.,Kanaya S.(2011) Dynamics of time-lagged gene-to-metabolite networks of Escherichia coli elucidated by integrative omics approach. Omics 15 (1-2), 15-23.
( 2011/01/01 )